Populus trichocarpa (black cottonwood): 7478534 Help Entry 7478534           CDS       T01077                                  Name (RefSeq) protein DAMAGED DNA-BINDING 2   KO K10140   DNA damage-binding protein 2 Organism pop  Populus trichocarpa (black cottonwood) Pathway pop03420   Nucleotide excision repair pop04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:pop00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     7478534   09124 Replication and repair    03420 Nucleotide excision repair     7478534  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:pop04121]     7478534    03400 DNA repair and recombination proteins [BR:pop03400]     7478534 Ubiquitin system [BR:pop04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      7478534 DNA repair and recombination proteins [BR:pop03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       7478534 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_EIPR1 WD40 Beta-prop_WDR3_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd EIF3I WD_LRWD1 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Motif Other DBs NCBI-GeneID:  7478534 NCBI-ProteinID:  XP_002299813 UniProt:  B9GII4 LinkDB All DBs Position 1:26698575..26703831 Genome browser AA seq 564 aa AA seqDB search MAPRTRRMAFPKVLIERDTDSEQSSSSDDEDELEEEDEGPPSEPEPEEEDSTKNGYEERI EEDLSLKKKGKAPITISLKKVCKVCKKPGHEAGFKGATYIDCPMKPCFLCKMPGHTTMTC PHRVAIEHGVIPAPRTSTHNTVEYVLQRQLRPRILPIKPAYVIPDQVCCAVIRYHSRRVT CLEFHPTKNNILLSGDKKGQVGVWDFDKVHERMVYQNIHTCIVNNMRFKSTNDGMVYAAS SDGTISSTDLETGMSSSLMNLNPNGWQGPSNWRMLYGMDINSEKGVVLVADNFGFLYMVD TRSNSKIGEAILIHKKGSKVVGLHCNPVQPELLLSCGNDHFARIWDMRQLKAGSSLSDLA HKRVVNSAYFSPLSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAE WDPKDPTESLAVIGRYISENYNGAALHPIDFIDISTGQLVAEVMDPNITTISPVNKLHPR DDILASGSSRSLFIWRPKEKSEPVEKKDESKIIICGGAMKKRKGKFRGESDDDSEDDGCV SKGKNFQFKKAESKSAPRPRKVNK NT seq 1695 nt NT seq  +upstreamnt  +downstreamnt atggcccctcggacaagaagaatggcgtttccgaaagtgttgattgagagagacaccgac tccgagcaaagttcttcatcggacgatgaagatgagttggaagaagaagatgagggccca ccatcagaaccagaaccagaagaggaggattcaaccaaaaatggatacgaagagagaata gaagaagatttaagtttaaaaaagaaaggaaaagcacccatcactattagtctcaagaaa gtttgcaaagtgtgtaagaaaccgggacatgaagcgggatttaaaggagcaacatacata gattgtcctatgaaaccttgctttctctgcaaaatgccaggccacactacaatgacatgc ccgcatagagtggcaattgagcatggtgtaatcccagcaccccgtacaagtactcataat acagtggaatatgtcttacagcgccagcttagaccaagaatccttccaataaaaccagca tatgttataccagatcaagtttgttgtgcagttatcagataccacagcaggcgagtaaca tgtttggaatttcatccaacaaaaaataacatccttttatctggagataagaaaggacaa gttggagtttgggattttgacaaagtgcatgaaaggatggtttatcaaaacatacacact tgtattgtaaataacatgaggtttaaatctacaaatgatggtatggtatatgctgcatcc tctgatggaacaattagtagcactgatttggagactggaatgtcatcatctctgatgaac cttaatcctaatggctggcagggtccaagtaattggagaatgctttatggcatggatatc aattcagagaaaggtgttgtgcttgttgctgacaactttggttttctctacatggtggat acacgatccaacagtaaaattggggaggcaattttgatccataagaaaggtagcaaagtt gttggacttcattgcaatccagttcaaccagagcttcttttgagctgtggaaatgatcat tttgctcgtatatgggatatgcgtcaactgaaagctggatcatctctttctgaccttgca cacaaacgcgttgttaactctgcatatttttctccattgtctggtagcaagattcttacc acttcacaagacaaccgcctgcgtatttgggattctatatttggaaacttggactcccca agccgagaaatcgtacacagtcatgattttaacagacatctgacccctttccgtgctgaa tgggatccaaaggatccaacagagtcccttgcagttattggtcgctacataagcgaaaat tacaatggagctgccttgcatccgattgattttattgacattagcactgggcaactagtt gctgaagttatggatccaaacatcaccaccattagtcctgtgaacaagctacatccacga gatgatattttggcatctggcagttcgaggtcccttttcatttggaggccaaaggagaag tctgaacctgtggaaaagaaagatgaaagcaagattattatttgtggaggtgctatgaaa aagcgtaaaggcaagtttcgtggtgaaagtgatgatgattctgaagatgatggatgtgta tccaagggcaagaattttcaatttaaaaaggctgaatcaaaatcagctcccagacctcgc aaggttaacaaataa

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