Populus trichocarpa (black cottonwood): 7478535
Help
Entry
7478535 CDS
T01077
Name
(RefSeq) cis-prenyltransferase 4, chloroplastic
KO
K11778
ditrans,polycis-polyprenyl diphosphate synthase [EC:
2.5.1.87
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00900
Terpenoid backbone biosynthesis
pop01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
7478535
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pop01006
]
7478535
Enzymes [BR:
pop01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.87 ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific]
7478535
Prenyltransferases [BR:
pop01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
7478535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
Motif
Other DBs
NCBI-GeneID:
7478535
NCBI-ProteinID:
XP_002298315
UniProt:
B9GII5
LinkDB
All DBs
Position
1:complement(26660734..26662864)
Genome browser
AA seq
305 aa
AA seq
DB search
MQSLNFPTPIYNNNIPTPQKANHFLFRNRRDQTPRFPTLLLAAEHDLALKDEENKGGAVV
PLPEGLRREVMPRHVAVIMDGNAKWARQRGFSAASAGHEAGGRSLRELVKSCCEWGIRVL
TVFAFSYDNWTRPKMEVVFLLSLFERMLQSELDNFMRKGIRVSTIGDSSRLPESLKKLIS
DIEEKTRDNCRLHLILAVSYSGKYDVTQACKSIAHKVKDGIVQLEDIDESLLEQELETNC
AQYPCPDLLIRTSGELRISNFLLWQLAYTELFFAEALWPDFGKAEFIEALTSYQQRQRRY
GGRHS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccttgaattttccaacaccaatttacaacaacaatattccaacgcctcaaaaa
gctaaccactttctctttcgaaacagaagagaccaaacgccccggttccctactttactt
ctcgcggccgagcatgacttggctctcaaagacgaagaaaataaaggaggggcggtggtg
ccattgccggagggtctacggagggaggtgatgccccggcacgtggcagtgataatggat
ggcaatgcgaagtgggccaggcagcggggtttttcagcagcatctgctgggcatgaagct
ggtggacggtcacttagggagcttgtaaagtcgtgttgtgagtgggggattagagtgctc
actgtttttgccttttcttatgacaattggactaggcctaagatggaggttgttttcttg
ttgagtttatttgaaaggatgttgcagtccgagttggataactttatgaggaagggtatt
cgagtctctacaattggagactcctccaggctcccagagtctctaaagaaactgataagt
gatatagaggagaagacgagagacaattgcagactccacctcatcttggcagtcagctat
agcgggaaatatgatgttacacaagcatgcaaaagcattgctcacaaggtgaaggatggt
attgttcagttggaagacatcgatgaaagcctacttgaacaggagttggaaacaaattgt
gcccagtatccatgtcctgatttattgataagaaccagcggagaacttaggatcagcaat
ttcttactgtggcaactggcctacactgagcttttctttgcagaagcgctctggcctgac
tttggaaaagctgagtttatagaggccttaacttcctatcagcagaggcagagacgctat
ggtggacggcattcataa
DBGET
integrated database retrieval system
