KEGG   Populus trichocarpa (black cottonwood): 7478554
Entry
7478554           CDS       T01077                                 
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03030  DNA replication
pop03410  Base excision repair
pop03420  Nucleotide excision repair
pop03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    7478554
   03410 Base excision repair
    7478554
   03420 Nucleotide excision repair
    7478554
   03430 Mismatch repair
    7478554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pop03032]
    7478554
   03400 DNA repair and recombination proteins [BR:pop03400]
    7478554
DNA replication proteins [BR:pop03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    7478554
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     7478554
   MMR (mismatch excision repair)
    Other MMR factors
     7478554
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    7478554
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9 Ribosomal_L14 DUF8074
Other DBs
NCBI-GeneID: 7478554
NCBI-ProteinID: XP_002298328
UniProt: B9GIV9
LinkDB
Position
1:complement(26419137..26421032)
AA seq 268 aa
MLELRLVQGSLLKKVLEAIKDLVNDANFDCSSSGFSLQAMDSSHVALVALLLRSEGFEHY
RCDRNMSMGMNLGNMSKMLKCAGNDDIITIKGDDGSDTVTFMFESPTQDKIADFEMKLMD
IDSEHLGIPEAEYHAIVTMPSAEFSRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI
VLRQNTTVDKPEDATVIEMNEPVSLTFALRYMNSFTKATPLSNTVKISLSSELPVVVEYK
IAEMGYVRYYLAPKIEEDEDENETKPQV
NT seq 807 nt   +upstreamnt  +downstreamnt
atgttggagctaaggctggtacaagggtctcttctgaagaaagttttagaggcaatcaag
gacctggtcaacgatgcaaactttgactgctcgtcctctgggttctctctccaggccatg
gattccagccacgttgccctggtggctctactcctcagatcggagggtttcgaacactac
cgctgtgaccgtaacatgtcaatgggcatgaatcttggtaacatgtctaagatgctgaag
tgtgctggaaacgatgacatcatcaccattaaaggcgatgatggtagcgatacagtaact
ttcatgtttgaaagtcccacacaagacaaaattgctgattttgagatgaaactgatggac
atcgatagtgagcacctaggaatcccggaggcggaataccatgctattgttacgatgcct
tcagccgagttttcaaggatttgtaaagatctttctagcattggtgatacagttgtgatc
tccgtgacaaaggagggtgttaagttttctacaagaggtgatattggaactgcaaatatt
gtcctcaggcaaaacaccacagttgataagccggaagatgccactgtcattgagatgaac
gagccagtgtcattgacatttgcactgaggtacatgaactccttcacgaaggcaacccca
ttgtcaaacacagttaaaatcagcttgtcttcagagctacctgttgtggttgagtacaaa
atcgctgaaatgggttacgtcagatactacttggctccaaagatagaagaggacgaggat
gagaatgagactaaacctcaagtttaa

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