Populus trichocarpa (black cottonwood): 7478706
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Entry
7478706 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7478706 isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7478706
Membrane trafficking [BR:
pop04131
]
Protein recycling
Others
Retriever complex
7478706
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_3
Motif
Other DBs
NCBI-GeneID:
7478706
NCBI-ProteinID:
XP_024449189
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Position
1:37114319..37130705
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AA seq
942 aa
AA seq
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MMELKDQRLRSRKSVFRMEFRRRDYSAEEQGHVLRRSRTDHHPLLPPSPSFHNQVVVEKN
GNNDFFDPLRGLNAVDSTSAEEKAANTTTNNNSQVSSKEWTSFKRFLMQKFPVSKMISIA
SMPDVIIKSSTSFRKSSESSHLEEVDDPQRISQEDVKVITGQEYVSRLHELKDEINRAWH
AEDRVTALKLTIKVAKLLMDTSVLQFYPTLFVLATDVLDMLGDMVWKRIQQKAEFSEDGT
FLCSLPENFKASDICSDAKETCNNWFCKVGSIRELLPRIYLELAIFPCWRFLVDQPLDSL
QRLVMMARGVVDPLASAYCRLYMAHCARKLPLSDIAGHLVTCVNDTKILLMRHLSAKEDG
HFADKKRLLVSLMEPTIEYIMKCIFENTSQSQRQVDSVLLELGLGRNQEDLCGSSPCISF
VLHHLLKELPTEVIRSNFVGILHLIECSQDHYFDQCLNYRLLGFRLSESRSKLDIVYSVV
DKVIQAVAQYDRLDQYVTVVDAYMDIVLQNQMDNHLKTILEGISKRACHKEIHEDELESL
KSILMKLLSHFTDLHDVLALDHFLEILDVMYGNPRSNINMHILSMATRTGYLRDLSTIQL
LFEISQSLHDVIDFGSMKDDEYQKPLRLISRFVEMVDYGTEMEQHLTFLVECRGAFGIIN
ELKETLVHSSNCLAIKALKDGRKHLNFVKSCIAFSEVTIPSVLEHVVQFNLYIETAEVAL
LGGSVSHSDGLVVSAISCLECFDLTDGSRTSIDAGGMLSSIQKLCSLLVMFPGNPDQGIT
RFPNSILSLIYFKSWMTPKMKIRLFCGIILLLATLSQDKLPYYPYCAEIMGNDLLFFGDP
SYAHEIAALSECVLQNLISFIEQEPPKAARGTMALEACNCIASSFVVCQDILEVCWKLIE
TARLCLSADDRYLQSTIKYLNEQLPPSCSNLIFAQHYDLSKC
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgatggaattgaaagatcaaagacttagaagtcgaaaatctgtctttcgcatggagttc
cggcgtcgagattacagtgccgaagagcaaggccacgtgcttcgtcgctcacgcaccgat
caccatcctcttttacctccatcgccgtctttccacaaccaggtggtcgttgaaaagaat
ggaaataacgatttctttgacccgctaagaggactaaacgctgtggattcaactagtgct
gaagaaaaagctgctaatactactactaacaataacagtcaagtttcatccaaggagtgg
acttctttcaagagattcttaatgcaaaaatttccagtctccaaaatgatatcaattgct
tctatgcctgatgtgatcattaaaagtagcacatcattccggaaatcttcggaaagtagt
catttagaggaagtggatgatccacaaaggatttcccaagaagatgtgaaggtcattact
ggacaggagtatgtctcacgattacacgagctcaaagatgaaatcaaccgtgcttggcat
gctgaagatcgtgtaacagctttgaagttaactataaaggttgctaagcttttgatggat
acatcggttctacagttttatcctacattatttgtacttgctacagatgtattggacatg
cttggagatatggtatggaaacgcatccagcagaaagctgaattttcagaagatggaacc
tttctgtgctctttaccagagaattttaaagcaagtgatatttgctctgatgcgaaagaa
acttgcaataactggttttgcaaagttggttcaattcgagagctacttccacgcatttat
ttggagttggctatatttccttgctggcgttttctggttgaccaacctctagatagtctc
cagcgcctcgttatgatggcaagaggggtagttgatccattagcatctgcctactgccgt
ttgtacatggcccactgtgcaaggaagttgcctttgtctgatatagcagggcacctggtc
acctgtgttaatgacaccaaaattctattgatgcgtcatttatcagcaaaggaggatgga
cattttgctgacaagaaaaggttgcttgttagtctgatggaaccaactattgaatatatt
atgaaatgcatatttgagaatacttctcagtctcagagacaagtagattctgtacttctg
gagttaggattgggaaggaatcaagaagatttatgtgggagttccccttgtatctcattt
gttcttcaccatctactgaaagaacttccaactgaagtaattaggtccaattttgtgggt
atccttcatctgattgagtgcagccaagatcattatttcgatcagtgcttgaattacagg
ttacttggattcaggctcagtgaaagtagatccaaactagacattgtctactcagtagtg
gataaagttattcaggcagttgctcaatatgatagacttgatcagtacgtgacggttgtg
gatgcttatatggacattgttcttcaaaatcagatggataatcatttgaaaaccatttta
gagggtatttcaaagcgagcatgccataaagaaatacatgaagatgagcttgaaagcttg
aagtcgattttgatgaagcttctttctcatttcacagacttgcacgatgtacttgctttg
gaccattttcttgaaatcttagatgtaatgtatgggaaccctaggagtaacatcaatatg
catatccttagtatggcgacaaggaccggttatttgcgtgatctgtcaaccatacagttg
ctttttgaaatttctcagtctctacatgatgttatagattttggaagtatgaaagatgat
gaataccaaaagccactacggctgatttctcgttttgttgagatggttgactatgggaca
gagatggaacaacatctaacgtttttagttgaatgccgtggagctttcggtatcataaat
gaactcaaggagactctagtccattcaagcaattgtttggctatcaaagctttgaaagat
ggaagaaagcacctcaattttgtcaaatcttgcatagcatttagtgaggtcacaatacct
tctgttttagagcatgttgtgcagtttaatctttatattgagaccgctgaggttgcttta
ttaggtggttcagtttctcattcagatggcctggtggtttctgcaataagctgcctagaa
tgttttgacttgacagatggctccagaacatcaattgatgctggtggaatgctctcatcc
attcaaaaattatgtagcctcttggttatgtttccaggtaatcctgaccaaggcatcaca
agatttccaaatagcattctctctctcatttatttcaagtcatggatgactccaaaaatg
aagataaggttattttgtgggataattttgttgttggcaacactttctcaggataagctc
ccatactatccatactgtgcggagattatgggcaatgacctgttattttttggtgatccg
tcctatgcacatgaaattgctgcattgtctgagtgtgttcttcagaatctcattagtttc
attgaacaagagcccccaaaggctgctcgtggaaccatggcactcgaagcttgcaactgc
atcgcatcatcttttgtggtatgtcaggatatattagaagtttgctggaagctgattgaa
actgctaggttgtgccttagtgctgatgacaggtacttgcagtccactatcaaatattta
aacgagcagctgcctccatcctgtagcaatctgatatttgcacaacactatgatctatca
aaatgttaa
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