Populus trichocarpa (black cottonwood): 7478755
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Entry
7478755 CDS
T01077
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04145
Phagosome
pop04517
IgSF CAM signaling
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
7478755
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
7478755
09142 Cell motility
04814 Motor proteins
7478755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7478755
03036 Chromosome and associated proteins [BR:
pop03036
]
7478755
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7478755
04147 Exosome [BR:
pop04147
]
7478755
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
7478755
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
7478755
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
7478755
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7478755
Exosomal proteins of other body fluids (saliva and urine)
7478755
Exosomal proteins of colorectal cancer cells
7478755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
7478755
NCBI-ProteinID:
XP_002313194
UniProt:
B9HN26
LinkDB
All DBs
Position
9:complement(7998369..8000873)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDSKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEGDDDDGDEYM
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtgcatttcgatccacattggtcaagccggtattcaagtcggaaatgcctgc
tgggaactctactgcctcgagcatggcatccagcctgatggtcagatgccaagtgacaag
actgttggtggaggggatgatgcctttaacacctttttcagtgaaactggtgccgggaag
cacgtccctcgtgctgtctttgtagatcttgagcccactgtcattgatgaagtcaggact
ggaacttaccgccaacttttccaccctgaacaacttattagcggcaaggaggatgctgcc
aacaactttgcccgtggacactataccattggcaaggaaattgttgacctgtgcttggac
cgtatccgaaagctcgctgacaactgtactggtctgcaaggcttcctagtattcaatgct
gttggtggtggtactggatctggtcttgggtcccttctcttggagcgtttgtctgttgac
tatggaaagaaatccaagttgggtttcactgtgtatccatctcctcaggtgtccacatct
gttgttgagccctacaacagtgttctctcaactcactcccttttggaacacacagatgtg
gctgtgcttcttgacaatgaagctatctatgatatctgcaagcgttctcttgacattgag
cgacccacctacaccaacctcaacaggcttatctctcaggtcatttcctccttgaccgcc
tctctgaggtttgatggtgctttgaatgtggatgttactgaattccagactaacttggtc
ccttacccaagaatccacttcatgctttcctcctatgcaccagtcatctctgctgagaaa
gcctaccatgaacaactctctgttgctgagatcactaacagtgcttttgagccttcatca
atgatggctaaatgtgatcctcgccatggaaagtacatggcctgttgtctgatgtaccgt
ggtgatgttgtgcccaaggatgttaatgctgctgttgccacgatcaagaccaagcgtact
attcagtttgttgactggtgccccactggattcaagtgtggtatcaattaccagccaccc
actgttgttcctggtggtgatcttgccaaggtgcagagggctgtttgcatgatctccaat
tctaccagtgttgctgaggtgttctctcgcattgactccaaatttgacctcatgtatgcc
aagcgtgccttcgtgcactggtatgttggtgagggcatggaggaaggcgagttctctgag
gctcgtgaggatcttgccgcccttgagaaggattatgaggaggttggtgctgaatcagct
gagggtgatgatgatgatggtgacgagtacatgtga
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