KEGG   Populus trichocarpa (black cottonwood): 7478755
Entry
7478755           CDS       T01077                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04145  Phagosome
pop04517  IgSF CAM signaling
pop04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pop00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    7478755
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    7478755
  09142 Cell motility
   04814 Motor proteins
    7478755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7478755
   03036 Chromosome and associated proteins [BR:pop03036]
    7478755
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pop04812]
    7478755
   04147 Exosome [BR:pop04147]
    7478755
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     7478755
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     7478755
Cytoskeleton proteins [BR:pop04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    7478755
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7478755
  Exosomal proteins of other body fluids (saliva and urine)
   7478755
  Exosomal proteins of colorectal cancer cells
   7478755
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 7478755
NCBI-ProteinID: XP_002313194
UniProt: B9HN26
LinkDB
Position
9:complement(7998369..8000873)
AA seq 451 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDSKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEGDDDDGDEYM
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagagagtgcatttcgatccacattggtcaagccggtattcaagtcggaaatgcctgc
tgggaactctactgcctcgagcatggcatccagcctgatggtcagatgccaagtgacaag
actgttggtggaggggatgatgcctttaacacctttttcagtgaaactggtgccgggaag
cacgtccctcgtgctgtctttgtagatcttgagcccactgtcattgatgaagtcaggact
ggaacttaccgccaacttttccaccctgaacaacttattagcggcaaggaggatgctgcc
aacaactttgcccgtggacactataccattggcaaggaaattgttgacctgtgcttggac
cgtatccgaaagctcgctgacaactgtactggtctgcaaggcttcctagtattcaatgct
gttggtggtggtactggatctggtcttgggtcccttctcttggagcgtttgtctgttgac
tatggaaagaaatccaagttgggtttcactgtgtatccatctcctcaggtgtccacatct
gttgttgagccctacaacagtgttctctcaactcactcccttttggaacacacagatgtg
gctgtgcttcttgacaatgaagctatctatgatatctgcaagcgttctcttgacattgag
cgacccacctacaccaacctcaacaggcttatctctcaggtcatttcctccttgaccgcc
tctctgaggtttgatggtgctttgaatgtggatgttactgaattccagactaacttggtc
ccttacccaagaatccacttcatgctttcctcctatgcaccagtcatctctgctgagaaa
gcctaccatgaacaactctctgttgctgagatcactaacagtgcttttgagccttcatca
atgatggctaaatgtgatcctcgccatggaaagtacatggcctgttgtctgatgtaccgt
ggtgatgttgtgcccaaggatgttaatgctgctgttgccacgatcaagaccaagcgtact
attcagtttgttgactggtgccccactggattcaagtgtggtatcaattaccagccaccc
actgttgttcctggtggtgatcttgccaaggtgcagagggctgtttgcatgatctccaat
tctaccagtgttgctgaggtgttctctcgcattgactccaaatttgacctcatgtatgcc
aagcgtgccttcgtgcactggtatgttggtgagggcatggaggaaggcgagttctctgag
gctcgtgaggatcttgccgcccttgagaaggattatgaggaggttggtgctgaatcagct
gagggtgatgatgatgatggtgacgagtacatgtga

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