Populus trichocarpa (black cottonwood): 7478809
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Entry
7478809 CDS
T01077
Name
(RefSeq) serine/threonine-protein kinase ATG1a
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
7478809
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pop01001
]
7478809
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7478809
03029 Mitochondrial biogenesis [BR:
pop03029
]
7478809
Enzymes [BR:
pop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
7478809
Protein kinases [BR:
pop01001
]
Serine/threonine kinases: Other
ULK family [OT]
7478809
Membrane trafficking [BR:
pop04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
7478809
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
7478809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
ATG1-like_MIT2
Kdo
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
7478809
NCBI-ProteinID:
XP_024451482
LinkDB
All DBs
Position
2:complement(14328743..14334589)
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AA seq
693 aa
AA seq
DB search
MDLNQTRLIGDYILGPIIGRGSFAVVRRAKHRSSCLEVAVKEIDKKLLSPKVSDNLLKEI
SILSTINHPNIIRLFESFETEDRIFLVLEYCDGGDLAGYIQRHGKVTEAVARHFMRQLAA
GLQALQEKHLIHRDLKPQNLLLLSNDLTPQLKIGDFGFARSLTSSDLADTLCGSPLYMAP
EIIQNKKYDAKADLWSVGAVLFQLVTGKPPFDGNSQYQLFQNILTSTELRFPQGALEELH
PDCVDLCRSLLCRNPVERLTFKEFFNHKFFEEPRLLLDAKSPLLPQMKSVVEQFDASASN
TRSQMGHCLHSANRNAILTSTSEHDNITMLAKVHDSTSRNDSVHGIVPSIVHDRMGRSAY
GSQSSLDQLRVADLMESLEKDYVIVNRHFSSMENFSYYLETSLQDSSTSKSSVQLPQKNN
QDMVVAIQTEAFTGSSVSSANDPQVHGSEPLTASCVPNILREVQGLPIPHPSIKLHFLNQ
YAQAIVELAQEKYDSGLFLESFSVELVVLAIWKKVLEICNHWVASNEGSELPESSSANES
TFVHGGIDLIPPASGKMDFIEPSSAYKWAEKSFILAFDRTEKLSHNLRYMDAAAEMPDAM
ELIFQEALAVGRSGAVDEYMENKGGADVSYSKAMLLLHFIAEEATSLPLKPPFSLTSACR
KRIQSYILNLQSHRSHFSMLQPIPEQSPDSPTK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaaccagacccgtttgattggtgattatattcttggcccgataatcgggcgg
ggatcttttgctgttgttcggagggctaaacaccggtcttcgtgtttagaagttgcggtt
aaagaaattgacaaaaaattacttagtccaaaagttagtgataatttgctcaaagaaatt
tctattcttagtactataaatcaccccaacattatccgcctttttgagtcctttgagact
gaagataggatatttcttgtattggaatactgtgatggaggtgatcttgctgggtatatt
caacgccatgggaaagtaactgaggctgtagcaaggcactttatgaggcaattggctgca
gggttgcaagcgcttcaagaaaaacatcttattcatagagacttaaaaccacagaaccta
cttttgttatcaaatgacttaactccacaattgaagataggtgattttggctttgcaagg
tctttgacatcatcagacttggctgatacactatgtggctcaccattatacatggcccca
gagattattcagaataaaaagtatgatgcgaaggctgacttatggagtgttggggcagtt
ttgttccagctggtaactgggaagcctccatttgatggcaacagccaatatcagcttttc
cagaatattttgacatctacagagcttaggtttccacaaggtgcgttggaggagctccat
ccagattgtgtggatctttgcagaagccttttatgccgaaaccctgttgagcgattaaca
ttcaaggagttcttcaatcacaagttctttgaggagccaaggctattgctggatgctaaa
tctcctctacttccacaaatgaaatcagtagttgagcagtttgatgcgtctgcttctaat
acaaggtctcaaatggggcattgcttgcactcagctaatagaaatgctatattaactagc
acatctgagcatgacaacataacaatgctggcaaaggttcatgacagtacatccagaaat
gacagtgttcatgggattgtgccaagtattgtgcatgataggatggggagatctgcttat
ggcagccaatcttcattggatcagcttcgagttgctgatttaatggagtccctagagaag
gattatgttattgttaatcgtcatttttcttcaatggaaaatttctcttattaccttgaa
acatctctgcaagatagctccaccagcaaatcttctgtacagctaccacagaaaaataac
caggatatggttgttgctatacaaacagaggcgtttactggtagttctgttagtagtgca
aacgatcctcaggtccatggatcagagccattaactgcatcatgtgtgccaaatatatta
agggaagtgcaaggactacccataccgcatccctcaattaagcttcacttcctaaatcag
tatgcacaggcaattgtagaactagcccaagaaaagtatgattcaggattgtttctggaa
tcattttcagttgagcttgttgttttggctatatggaagaaagttcttgaaatttgcaac
cactgggtagcctctaatgaagggagcgaattacctgaaagcagttcagccaatgaatct
acatttgttcatggaggcatagatttgatcccgcctgcaagtggtaaaatggattttatc
gagccttcttctgcctacaagtgggcagaaaaaagtttcattctcgcgtttgatcgtaca
gagaagttatcgcataatctccgatacatggatgctgctgctgagatgcctgatgccatg
gaactgatattccaagaagcactcgctgttgggagaagtggtgccgtagatgaatatatg
gagaacaagggtggtgctgatgtctcatattccaaagcaatgcttctgcttcattttata
gcagaagaagcaacatctctcccactgaaacctccattttcattaacttctgcttgtagg
aagcgaatccaaagctacattctcaacttgcagtctcatagatctcacttctcaatgttg
cagcctattcctgaacaatcccctgattctcctaccaagtag
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