Populus trichocarpa (black cottonwood): 7478832
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Entry
7478832 CDS
T01077
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.9 isoform X1
KO
K14487
auxin responsive GH3 gene family
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7478832
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
7478832
NCBI-ProteinID:
XP_002302704
UniProt:
B9GRX0
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Position
2:17180086..17183662
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AA seq
596 aa
AA seq
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MDGKKLEYKGWVALKEIERLTEKADEVQETILKAILMQNGETEYLSKYMKGSKDVDEFKF
HVPVITYKDVCPYIQRIATGEDSSLVTGHPVTEMLCSSGTSAGEPKLMPSIAEDLDRRTF
VYNLIMPIMNQYIFGLDEGKAMFLYFIKAEMSTPCGLPARTVLTSYYKSKHFKCRTRDAF
NDFTSPDQAILCKDSNQSMYCQLLSGLVHRHQVLRLGAVFASAFLRAISFLERNWGRLCN
DIRSGDLDPTITDPECRSCMSMLLTSPNPSLADEIEDICSNTSWKGILCHLWPRAKYIEA
VVTGSMAQYIPSLEYYSEGKLPLVCTMYASSECYFGVNLKPLCDPADVAFTLLPNMCYFE
FIHLGENGTWLVNKDEEGEVPNDKLVNLVNVRLGSYYELVVTTFAGLYRYRIGDVLRVTG
FHNKAPQFQFICRRNVVLSIDNDKTNEEDLHKSITAAKKLLEPYDALLVEYTSYADTSSV
PGHYVLYWEILHDASFPDSSAQLDVKLLQECCISVEEELDYVYRRCRAHDKSVGPLEIRV
VESGTFEALMDFFIGQGASINQYKTPRSIKSNAALKLLNSHVKASAFSPRDPAWIP
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaagaaattggagtacaaaggttgggttgcgttgaaagaaattgagaggctc
acagagaaggctgatgaagttcaggaaactatactgaaagcgatcttaatgcaaaatggg
gaaactgagtatttgagtaagtacatgaaggggtcaaaggacgtagacgagtttaagttc
catgtccctgtcattacttacaaggatgtctgtccttatatccaaaggattgctactgga
gaagactcttctcttgtcaccggtcatcctgttactgagatgttatgcagttcagggact
tctgcaggagagcctaagttaatgccatcaatagcagaagatctagatcgccgaaccttt
gtatataacctcatcatgccgataatgaaccagtacatctttggtcttgatgagggcaaa
gcaatgttcctgtactttatcaaggcggaaatgtctactccctgtggcttaccagctcga
actgtgctaactagttactacaaaagcaaacacttcaagtgccgaacccgtgatgcattc
aatgatttcactagcccggaccaagccatcctatgcaaggatagcaaccagagcatgtat
tgccagttgctatctggtctagttcaccgtcatcaagtcctaaggcttggagctgtgttt
gcgtcagcttttcttcgagccatttcatttcttgagcgcaactggggtcgtctatgcaat
gatatacgcagtggtgacttagatcctaccatcacagatcctgaatgtcgttcatgcatg
tcaatgttactaacatcaccaaatccttctcttgcggatgagattgaggatatttgtagc
aatacatcatggaagggaattttatgtcacctttggcccagagctaagtacattgaggcg
gtggtgactgggtctatggcacaatatataccatcgcttgagtattatagtgaagggaag
ttgcccttggtgtgtacaatgtatgcatcctcagagtgttatttcggtgtcaatttgaaa
cctttatgcgatcctgcagacgtggcttttaccctcttgcctaacatgtgttattttgag
tttatacatctgggagagaatgggacctggttagtgaacaaagatgaggaaggagaagtg
cccaatgataagcttgtcaatttggtgaatgttagactcggctcctactatgagttggtg
gttactacctttgctgggctatatcgttatcgtataggcgatgtactccgagtgacagga
tttcacaataaagccccgcaattccaattcatttgtaggagaaatgtcgttctcagcatt
gacaatgacaaaactaacgaggaagatcttcacaagagcatcacagctgcgaagaaatta
ctggaaccctatgatgccctcctcgtggaatacactagctatgcagacacatcgtctgta
ccggggcactatgtgctgtattgggaaattctccatgatgcatcattcccagactcttca
gcccaacttgatgtcaaactactccaagaatgttgcattagtgtagaagaagaacttgat
tatgtgtacaggcgatgccgtgctcacgacaagtctgtaggaccactagagatacgtgtg
gtggagtctggcacatttgaggcactaatggattttttcattggccaaggggcatcaatc
aatcagtataaaacaccaaggagcatcaagtcgaatgctgctcttaagttacttaattcc
catgttaaggcatcagcttttagtccaagagatcctgcttggatcccttga
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