Populus trichocarpa (black cottonwood): 7478845
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Entry
7478845 CDS
T01077
Name
(RefSeq) uncharacterized protein C57A7.06
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7478845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7478845
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
7478845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
7478845
NCBI-ProteinID:
XP_002302717
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All DBs
Position
2:16832555..16838151
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AA seq
899 aa
AA seq
DB search
MKMIEKKRKSRDGKKHDRPQKFTKKSKFSKKYGKSEDEKRRTGPRLPQSLRKELDRINPN
DQSCSEEDEGINGDVYEYEEEVPEEESKKNRRFDSVENYEYKLPEDFKDENVESDDDDYD
FDGGEKKIADHKGKKGDLDQLGDDVEDEDDERHLRMLQGITGMPSQAFQGRKKNKVVVSE
GYPESEYNPTRDVLDGDGRIAIEDLLESIQGKPGYRELRNITRHVEKKGKLLQAPLPKED
RDRLERNAAYEQSKKDITRWEPLVKRNREAPTIIFDKDTDSGFSTVGAIASEFEPRTEFE
KKMSSLVNDDKVMAAHKEDGSRLLELNKISLEDYVNSRNHIAKMRSLLFRHEVKMKRVKK
IKSKTYHRLLKKERLKGSVGMPMDAEEAKELAMKQEFKRAEERMTLRHKNQSKWAQRIVK
RGLDAQDEGTRAAMAEQLHQHALLTRKMNSMNDSSSSDDSSDEEDSENAGGSEEDKAPKL
LAQAREKTRRVLEEDDEVPDSGVLSLPFMKRALKKKKEAADEEGRLAIQEFESSLMQLED
ADGAEITKTGSVSGRRVFGASKMQVIEPKNKIRSSSYSSDSEAELEAEEDIDVGLGRTDD
VQNNIDVNSVLLDVDANTPRDSVLKISELVKDLGPKTTYEVSMLHSDTWKKMSSSRNEVD
TNGKRSRKVVEPVTHNRDIELEEVGEDSDADSEGQMLDGILSSEHKSSYKLPSQAELIRE
AFAGDDVQEEFSKDKEEIMNEENPEPEKPVQLPGWGQWTRVQKKKGLPSWVLEEHENAKR
KRDEALRKRKDAHLKHVIISEKLDKKAEKLLTGTLPYPFTSKEVFEQSIRMPIGPEFNPA
TAVRALNRPEVVKKQGLIIKPIRYEDVDSHERGEEHRESGQKQRINRSQGRVKAVVAKS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatagagaagaagagaaaatcgagagacggtaagaaacatgatagaccacaa
aaatttaccaaaaagtccaaattcagcaaaaaatacggcaagagtgaggacgagaaaagg
cgaaccggtccacgcttacctcaatctcttaggaaagagctcgatcgaatcaaccctaat
gaccagtcctgcagtgaagaagatgaaggtattaacggcgacgtttatgaatacgaggaa
gaagtgcctgaagaggaatcaaagaagaaccgccgcttcgattccgttgagaattacgag
tataagttacctgaggattttaaggatgagaatgttgaatcggatgacgacgattatgac
tttgatggtggcgaaaaaaagattgctgaccataagggtaaaaagggagacctagatcaa
cttggtgatgatgttgaagatgaagatgatgaacggcatctgaggatgttgcaaggaatc
actggaatgccaagtcaggcctttcaaggccggaagaaaaacaaagttgttgtatccgag
ggatatccagagtctgaatataatcctactcgtgatgttctggatggtgatggccgcatt
gctattgaagaccttcttgaaagcattcaaggaaaacctggttatagagagcttcgaaat
ataactcgtcatgtggagaaaaaaggaaagcttcttcaagctccacttcccaaggaggat
cgagacaggttagaaaggaacgctgcttatgaacaatcaaagaaagatattacaagatgg
gagcctttggtcaagaggaatagggaggcacctaccattatttttgataaagatacagat
tcagggttttcaactgtaggggcaatagcgtccgaatttgagcctagaactgagtttgag
aagaaaatgtcttcattagttaatgatgacaaggttatggcagctcataaagaagatggc
tcaaggcttcttgaattaaataagatatcccttgaagattacgtaaacagtcgaaatcat
attgcaaaaatgcggagccttcttttccgccatgaggtgaagatgaaacgcgtcaagaag
ataaaatcaaaaacataccatcggttgttgaagaaagaaagattgaaaggatctgtagga
atgccgatggatgcagaagaagccaaagaactggcaatgaagcaagagttcaaacgtgca
gaggaacgcatgaccttaaggcacaaaaaccaatcgaaatgggcacaacgtattgttaag
cgtggtttggatgcccaagatgaaggtactcgagctgctatggctgaacaactccatcag
catgctcttttgactaggaaaatgaactctatgaatgacagtagcagcagtgatgacagc
agcgatgaagaagatagcgaaaatgcaggtggttcagaagaggacaaggcacctaagttg
ctagcacaagcaagagagaagacaagacgagtattagaagaagatgatgaagtgcctgat
tcgggagtcctgtctttacctttcatgaaaagggcattgaagaaaaagaaggaagcagct
gatgaagaaggtaggcttgctattcaagagtttgaatcgtcattgatgcagctggaggat
gcagatggggcagaaattacaaaaacaggcagtgtgagtggtcgaagggtgtttggtgca
tctaaaatgcaggttatagaacctaaaaataagatcagatcaagcagttattccagtgat
agtgaagctgagttggaagctgaagaagacattgatgttggtttaggcagaacagatgat
gtgcaaaataatatcgatgtcaattctgttttgcttgatgtagatgccaacactcctcgg
gattctgttttgaagatttctgaacttgttaaagacctaggtcccaagacgacatatgaa
gtttctatgcttcattcagacacatggaaaaagatgagcagcagtcgaaatgaagttgac
accaatggcaaaaggtctcggaaagttgttgaacctgttacccataatcgagatatagaa
ttagaggaagtaggggaggatagtgatgcggatagtgaaggacagatgctggatgggatt
ttgtcttcagagcacaaatcatcttacaagcttccttcccaagcagagcttatacgtgaa
gcttttgcaggggatgatgtgcaagaagaatttagcaaagataaagaggaaattatgaac
gaggaaaatcctgaacctgaaaaacctgttcaacttcctggctggggccaatggactcgg
gtacagaaaaagaaaggtttgccttcatgggttttggaagagcatgaaaatgcaaagaga
aaaagggatgaggctctgaggaaaaggaaggatgcacatcttaaacatgttatcatctca
gagaagttggataaaaaggcagaaaaattgcttacaggaacactgccttaccccttcaca
tcgaaggaagtttttgagcagagcatccgcatgcctatagggcctgaattcaatcctgca
acagctgtcagagctcttaatcggcctgaagtggtgaaaaaacaagggctgattattaaa
ccaatcagatatgaagatgtggattcccatgaaagaggggaggagcatagagaaagtgga
cagaagcaaaggataaatcggagccaaggcagagtaaaggcagtagtggcaaagtcatga
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