Populus trichocarpa (black cottonwood): 7478910
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Entry
7478910 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7478910 isoform X1
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7478910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7478910
Spliceosome [BR:
pop03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
7478910
Complex C
U4/U6.U5 tri-SnRNP related factors
7478910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
C2H2-zf_KIN17
zf-C2H2
ECM10
Vma22_CCDC115
Motif
Other DBs
NCBI-GeneID:
7478910
NCBI-ProteinID:
XP_002319487
UniProt:
B9I709
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Position
13:complement(650640..654512)
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AA seq
202 aa
AA seq
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MANNNAGGSVDNTFRRKFDPEEYLERAREREKQEAEGRGKSKSKGPPVQRKPLKHRDYEV
DLDSRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVER
ASLQQVQERFEKLKKRREPGSFTEQDLDERILKQQEEEEERKRQRRERKKEKKKEKAAEE
EEADIDPDIAAMMGFGGFGSKK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataacaatgctggtggtagtgttgataatacattcagaagaaaattcgatcca
gaagagtacttagaacgcgctcgtgagcgtgaaaaacaggaggccgagggtcgtgggaaa
tctaaatcgaaagggccaccggtgcaaaggaagcccttgaagcatagggactatgaagtt
gatctcgactctcggttggggaaaactcaggttgttacaccaattgcacctctaagtcag
caggctggatactactgttcagtttgtgagtgtgtggtaaaggattctgcaaactacttg
gatcacatcaatggaaagaaacaccaaagagctttgggcatgtctatgcgggtggagcgt
gcatctcttcaacaggtccaagagcgatttgaaaagctcaagaaacgtagagaacctgga
agcttcacagagcaagatcttgatgaacggatcttaaaacagcaagaagaagaggaggaa
cgcaagcgtcaacgccgagaaagaaagaaagagaaaaagaaagagaaggcagcagaggag
gaagaagctgatattgatcccgatattgcagctatgatggggtttggcggtttcggttca
aaaaaataa
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