Populus trichocarpa (black cottonwood): 7478921
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Entry
7478921 CDS
T01077
Name
(RefSeq) phospholipase D zeta 1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00564
Glycerophospholipid metabolism
pop00565
Ether lipid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
7478921
00565 Ether lipid metabolism
7478921
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7478921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7478921
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
7478921
Membrane trafficking [BR:
pop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
7478921
Endosome - Golgi transport
Others
Others
7478921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
Motif
Other DBs
NCBI-GeneID:
7478921
NCBI-ProteinID:
XP_024439712
LinkDB
All DBs
Position
13:complement(814753..821127)
Genome browser
AA seq
1102 aa
AA seq
DB search
MATTTTEPLLAAGTMHSDNVHANLHPSYSFRQFPEPGWIFDELPKATIVSVSRPDTAGDF
SPMLLSYTIELQYKQFKWQLLKKASQVLYLHFALKKRALIEELHEKQEQVKEWLHSLGIV
DHAPVMQDADEPDDGAVPVHHQEESVRNRDVPSIAALSFLRPALGGQQGISDRAKVAMQN
YLNHFLGNLDIVNSPVVCKFLEVSKLSFSREYGPKLKEGYIMAKNLSKISKDDSDTTCFP
CQWFGFCDNNWQKVWAVLKPGFLALLEDPFNAKIIDILVFDVLPNSNDKGGNQVYLASQI
KERNPLYYAFKVSAGNRSINLRSKSGSKVKEWIAAIEDAGLRTSEGWCHSHRYGSYAPPR
GLAEDGSQAQWFVDGHAAFEAIASAIENARSEIFITGWWLCPELYLRRPFQDHASSRLDS
LLEAKAKEGVQIYILLYKEVSIALKINSMYSKKRLLNIHENLRVLRHPDHFSTGVYSWSH
HEKLVIIDYQICFIGGLDLCFGRYDTIEHRVGDCSADIWPGKDYYNPRESEPNSWEDVMK
DELDRRKYPRMPWHDVHCSLWGPPCRDIARHFVQRWNHAKRSKAPNEQTIPLLMPRHHMV
LPHYMGRSIDIESKNGEGNQKDTSRIDYFSSVSPIRDIPLLLPQEADATVVNGVNHELTA
KNMNNDRLDQSAWHCDSFSFTLQKSKDGNLAQDTPVKNPVDEHDFVDLESIMQISDRSSE
TSEKDVPDVSASECGQVGPRVSCRCQVIRSVSQWSTGASQHEESIHKAYCSLIEKAEHFI
YIENQFFISGLCGDEIIQNRVLDAIYKRVIQAYKENKCFRVIIVIPLSPGFQGGVDDGGA
ATVRAIMHWQYRTISRKKTSILYNLNTLLGPKTHDYISFCGLRTYGRLFVGGPLVTSQVY
VHSKVMIVDDRIAYIGSSNINDRSLLGSRDSEIGIVTEDKEFVESSMNGETWKAGKFAYS
LRRSLWSEHLGLSSGEIDKISDPVAETTYRDLWLATAKENSKIYQDVFACLPNDHIHSRA
ALRQSMNHWKEKLGHTTIDLGIAPEKIERNENGEIKMMDPIERLKLVKGHLVSFPLDFMM
CQEDLRPVFNEGEFYASPQVFH
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaacaacaacagagccactgttagcggcagggactatgcattctgataatgtc
catgcaaatttgcatccatcttattcattcaggcaattccctgaaccaggttggattttt
gatgaattgccaaaagcaaccattgtttctgtctcaagacctgatactgctggagatttt
agccccatgcttctgtcttacaccattgaattacaatacaaacagttcaagtggcagtta
ctgaagaaagcatcacaagttctctacttacattttgctttgaagaagcgtgcacttatc
gaggaacttcatgaaaaacaagagcaggttaaagaatggctccacagtttaggaatagta
gatcacgcaccagtcatgcaagatgctgatgaaccggatgacggtgctgttccagttcat
catcaagaagaaagtgttagaaacagagatgtcccatccattgctgctttgtcatttctt
cgtccggcactaggagggcagcagggtatttcagacagagcaaaggtggcaatgcagaat
tatttgaatcatttcctaggaaacttggatatcgtaaattcgccagtggtctgcaaattt
ttggaggtctctaagttgtccttctcgagggaatatggtccaaagctgaaagaaggttac
attatggcaaagaatctttcaaaaatctccaaggatgatagtgatacaacatgttttccc
tgccaatggttcggtttctgtgacaacaactggcagaaggtgtgggctgttttgaaacct
gggtttttggcccttttggaagatcctttcaacgcaaaaatcatagatattcttgttttt
gatgttctgccaaactcaaatgacaaaggaggaaaccaagtatatttagcaagccagata
aaggaacgcaatcctttgtattatgcatttaaggtttctgccggaaatcggagcataaac
ctgagaagcaaaagtggtagtaaagttaaagaatggattgctgcaatcgaagatgctggt
ttgaggacaagtgaggggtggtgtcattctcaccgctatggttcctatgctcctccaagg
ggtttagctgaagatgggagtcaagctcagtggtttgtggatgggcatgcagcttttgaa
gcaattgcttctgcaatagagaatgcaagatcagagatatttatcacaggctggtggctt
tgccctgagctgtatctaagaaggcctttccaagatcatgctagctcccggcttgattcc
ttgctagaagctaaagctaaggaaggggttcagatctatatccttctctacaaggaggtt
tctattgctttgaaaatcaacagtatgtacagcaagaaaaggcttcttaacattcatgag
aatttgagggttctgcgccatcctgatcatttctcaactggtgtctactcatggtcacac
catgaaaaactagtgatcatcgactaccagatttgctttattggaggattagatttatgc
tttggccgttatgacactattgaacatagagtaggtgattgttctgctgacatatggcct
ggaaaggactattataatccaagagaatcagaaccaaattcttgggaagacgtaatgaag
gatgaactggaccgtagaaaatatcctcgaatgccatggcatgatgtccattgttctctc
tggggaccgccttgccgtgacattgctaggcactttgttcaacgctggaaccacgctaag
agaagcaaagcaccaaatgagcaaacaattccactactgatgcctcgccaccacatggtc
cttcctcattacatgggaagaagtatagatattgaaagcaagaatggagaaggaaaccag
aaagacaccagcagaatagattacttttcctcagtatctccaatccgagatatccctttg
cttttacctcaggaagctgatgcaacagttgttaatggtgttaatcacgagttaactgcc
aaaaacatgaataacgatcgtcttgatcaatcagcttggcactgcgatagtttttcattc
actttgcagaaatccaaggatggaaatttggctcaagacacaccagtgaaaaatcctgtt
gatgaacatgattttgtggatcttgaaagcataatgcagatttcagatcggtcatcagaa
acatctgaaaaagatgtccctgatgtttctgccagcgaatgtggacaagtaggaccacgt
gtctcatgtcgttgtcaggttatcagaagtgtcagtcagtggtcaacaggagccagtcag
catgaagaaagcatccataaggcttactgttctctcattgaaaaagccgaacattttatc
tacatagagaatcagtttttcatatcaggactttgtggagatgagattatccagaatcgt
gttttggatgcaatatacaaacgtgttattcaagcttacaaagaaaataagtgctttcga
gtcatcattgtcataccactttcaccaggtttccagggaggtgtggatgatggtggtgca
gcaactgttagagccatcatgcattggcagtatcggaccatctcccggaagaagacttca
attctgtacaatcttaacacgttgcttggtcctaaaacacatgattacatttctttttgt
ggtctaaggacgtatggtagactttttgtgggaggtccgttggtcacaagtcaggtttac
gtgcatagcaaagttatgatagtagatgacaggattgcgtatatcggatcatctaacatc
aatgataggagtttgcttggatcgagagactctgagattgggatagttactgaagacaag
gagtttgttgaatcatcaatgaacggggagacttggaaagctggaaaatttgcttatagc
ctgcggcgctcgctgtggtctgagcatcttggtctttcttcaggagagatagataaaatc
agtgatcctgtagctgagacaacatatagagatttatggttggcaacggcaaaggaaaat
tcaaagatttaccaggatgtctttgcttgtcttcctaatgatcatatccactcgagagct
gctctcagacaaagcatgaaccattggaaggaaaaacttggtcacacaaccattgactta
ggaatagctcctgagaagatagaacgcaatgaaaatggagagattaagatgatggaccca
attgaaagactgaaattagtaaagggccatcttgtttcctttccattagacttcatgatg
tgtcaagaagatttaagaccagtattcaatgagggagaattttatgcatccccacaagta
tttcattaa
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integrated database retrieval system
