Populus trichocarpa (black cottonwood): 7479088
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Entry
7479088 CDS
T01077
Name
(RefSeq) polyubiquitin isoform X1
KO
K08770
ubiquitin C
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
7479088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7479088
Ubiquitin system [BR:
pop04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
7479088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Dsc3_N
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
7479088
NCBI-ProteinID:
XP_006383941
UniProt:
B9I0A4
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All DBs
Position
4:complement(1529032..1530187)
Genome browser
AA seq
305 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaactttgaccggcaagactataacccttgaggtggagagcagc
gacaccatcgacaacgtcaaagccaagattcaagacaaggagggcatcccaccggatcaa
caacgtttgatcttcgccgggaaacagctcgaagatggtcggactttggccgattacaat
attcagaaagagagcaccctccaccttgtcctccgtctccgtggaggtatgcagatattt
gttaagaccttgacagggaagaccataacccttgaggtggagagcagcgacaccatcgac
aacgtcaaggccaagattcaagataaggagggcatcccaccggatcaacaacgtttgata
tttgccgggaaacagctcgaagatggtcggactttggccgattataatattcagaaggag
agcaccctccaccttgtcctccgtctccgtggaggtatgcagatttttgtgaagaccttg
acagggaagaccattactctagaggtagagagcagcgacaccatcgacaacgtcaaggcc
aagattcaagacaaggagggcatcccacctgatcaacaacgcttgatctttgccggaaag
cagctcgaagatggccggactctggctgactacaatatccaaaaagagtctacccttcac
cttgtcctccgtctccgagggggtatgcagatttttgtgaagaccttgacagggaagacg
attacactggaggtggagagcagcgacaccattgacaacgtcaaggcaaaaatccaggac
aaggagggaatcccaccggatcaacagcgtctgatctttgccgggaagcagttggaggat
ggaagaaccttggcggattataatatccagaaagagtcgacccttcaccttgtcttgcgt
ctccgtggtggcttctga
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integrated database retrieval system
