KEGG   Populus trichocarpa (black cottonwood): 7479209
Entry
7479209           CDS       T01077                                 
Name
(RefSeq) autophagy-related protein 8f
  KO
K08341  GABA(A) receptor-associated protein
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    7479209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7479209
   04121 Ubiquitin system [BR:pop04121]
    7479209
   03029 Mitochondrial biogenesis [BR:pop03029]
    7479209
Membrane trafficking [BR:pop04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    7479209
Ubiquitin system [BR:pop04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   7479209
Mitochondrial biogenesis [BR:pop03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    7479209
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 7479209
NCBI-ProteinID: XP_002303509
UniProt: A0A3N7EQT1
LinkDB
Position
3:13330248..13333153
AA seq 122 aa
MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSIYEEKKDEDGFLYVTYSGENTFGTQI
PL
NT seq 369 nt   +upstreamnt  +downstreamnt
atggcaaagagttatttcaagcaagagcatgatcttgagaagaggagggcagaggctgct
aggatcagggagaagtacccagataggattccggtgattgtggagaaggcagaaagaagt
gatataccaaacatagacaagaaaaagtaccttgttccggctgacctgactgtggggcag
tttgtctatgtcatccgcaaaaggatcaagttgagcgcagaaaaggcaatctttatattt
gtggataatgtcctcccaccaacaggtgctatcatgtcttccatatatgaagagaaaaag
gatgaagatgggtttctctatgttacctacagcggagagaacactttcggaactcagatt
ccactgtag

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