KEGG   Populus trichocarpa (black cottonwood): 7479228
Entry
7479228           CDS       T01077                                 
Name
(RefSeq) cullin-1
  KO
K03347  cullin 1
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04120  Ubiquitin mediated proteolysis
pop04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    7479228
   04120 Ubiquitin mediated proteolysis
    7479228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7479228
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     7479228
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF3232 DUF5903
Other DBs
NCBI-GeneID: 7479228
NCBI-ProteinID: XP_024452514
LinkDB
Position
3:13715474..13722531
AA seq 738 aa
MSKDRKTTELEEGWEYMQNGISKLKGILDGSLEQFSSEEYMMLYTTIYNMCTQKPPNDYS
QQLYDKYKEAFQVYINSTVLPSIREKHDEFMLRELVKRWVNHKIMVRWLSRFFNYLDRYF
IARRSLPPLNEVGLTCFRDLVYQEVHSQAKDAVLDVIGKERDGEQIDRALLKNVLDIYVE
IGMSQMDHYADDFEAHMLQGTGAYYSVKAANWIREDSCPDYMIKAEECLKRERDRVSHYL
HSSSEIKLVEKVQHELLVVNANQLLEKEHSGVRALLRDDKVEDLSRMFRLYHKVTRGLEP
VSNVFKQHITAEGTALIQQAEDAASSQAANGGVQEQVLIRKIIELHDKYMTYVTACFQNH
TLFHKAMKEAFEIFCNKTVAGSSSAELLATFCDTILRKGGSEKLSDEAIEETLEKVVKLL
AFISDKDLFAEFYRKKLARRLLFDRSANDEHERSILSKLKQQCGGQFTSKMEGMVTDLQL
AKEHQSSFDEYLANNPSTRPGIDLQVNVLTTGYWPTYKSSDINLPAEMARGVEVFKEFYD
LKSKHRKLTWIYSLGSCHINAKFDQKTIELVVTTYQACLLMLFNTSDKLSYSEIMTQSNL
SDDDLPRLLHSLSCGKYKILSKEPNTKTVNQNDYFEFNHKFNDRMRRIKVPLPLVDERKK
VVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVLECVEQLNLMFKPDIKAIKKRIEDLIS
RDYLERDKENPNMFKYLA
NT seq 2217 nt   +upstreamnt  +downstreamnt
atgagtaaggatcgcaagactaccgaacttgaggagggatgggaatatatgcagaatggg
atctcaaagctgaaggggatcctggatggatcactagagcaattcagctctgaagaatat
atgatgctttacacaactatctacaatatgtgtactcagaagccaccaaatgactattct
caacagctttatgacaagtataaggaagcttttcaagtatatattaactccacggtatta
ccatcaataagggagaaacatgatgagtttatgctgagggagcttgtaaaaagatgggtt
aatcataaaattatggttaggtggttgtcacgcttcttcaattatcttgaccgttacttc
attgctcggaggtcacttccaccacttaatgaagttggactgacttgcttccgtgatctg
gtttatcaggaagtgcatagtcaagccaaggatgctgtgcttgatgtgattggtaaagaa
cgtgatggggaacagatagacagagcactgctaaagaatgttttagatatatatgttgag
attggaatgtcacaaatggatcattatgcagatgattttgaagcacacatgcttcaaggt
actggtgcttactattctgttaaagcagcaaactggattcgagaggattcttgtccagat
tacatgataaaggctgaggaatgcttgaagagagagagagatagagtttctcactacttg
cattcaagcagtgagataaaattagtagagaaagtgcaacatgagttattggtggtcaat
gcaaatcaactgctagagaaggaacattctggagttcgtgcattgctcagagatgacaag
gtggaagatctatccaggatgtttaggctttatcataaggttacccgtggcttggaacct
gtttctaatgtattcaagcagcatattactgctgaaggaacagccttgatccagcaggca
gaagacgctgcgagtagccaggctgcaaatggtggtgttcaggaacaagttctcattcga
aagataattgagctgcatgataaatacatgacttatgtgactgcttgttttcaaaaccac
acgttgtttcacaaggccatgaaagaggcttttgagatcttttgcaataaaacagttgct
gggagctcaagtgctgaactactggcaaccttttgtgacactatcctccgaaagggtgga
agtgagaaactaagtgacgaagccattgaagaaacactggagaaggtggttaagctgctt
gcatttattagtgacaaggacctttttgctgaattttataggaaaaaacttgcccgtcga
cttctttttgatcggagtgctaacgatgaacatgaaaggagtatactgtcaaaattgaag
cagcaatgtggtggacaatttacctcaaagatggaaggaatggtcacagatttgcaattg
gccaaggaacatcagtccagctttgatgagtatcttgccaataacccatccacacgtccg
gggattgatttgcaagtaaatgttctcacaactgggtactggccaacgtataaatcctct
gatatcaacctacctgcagaaatggctaggggagtggaagttttcaaggagttctatgac
ctgaagagcaagcacagaaaactaacatggatttactctttgggatcttgccacattaat
gccaagtttgaccaaaaaactattgagctggttgtgacgacctaccaggcttgtctcctg
atgctttttaatacttcagacaaactcagttactcagagattatgacccagtcaaacttg
agtgatgatgacttgcctagattgcttcattccctgtcatgtggcaagtataaaatcctt
agcaaggagccaaacacaaagactgttaaccaaaatgattactttgagttcaatcacaag
ttcaatgataggatgaggaggatcaaggttcctcttccacttgttgatgaaagaaagaag
gttgttgaagatgtcgacaaagacagacggtatgctattgatgctgcaattgtgcgcatc
atgaagagtcggaaagtgttgggtcatcaacagcttgtcttggagtgtgttgagcagttg
aatctcatgttcaagcctgacattaaagctatcaagaagcggatagaagatctgatctcc
cgagattatttagaaagagacaaggaaaacccaaacatgtttaagtacctggcttga

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