Populus trichocarpa (black cottonwood): 7479307
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Entry
7479307 CDS
T01077
Name
(RefSeq) signal peptide peptidase-like 2 isoform X2
KO
K09597
signal peptide peptidase-like 2B [EC:3.4.23.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7479307
Peptidases and inhibitors [BR:
pop01002
]
Aspartic peptidases
Family A22: presenilin family
7479307
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GFIT
Motif
Pfam:
Peptidase_A22B
PA
Motif
Other DBs
NCBI-GeneID:
7479307
NCBI-ProteinID:
XP_002299526
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Position
1:complement(8302008..8308588)
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AA seq
541 aa
AA seq
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MDFKKLCSIITITGVILLVCHPSSVTAGDIVHDDNLAPKKPGCENDFVLVKVQTWVGGEE
DAEFVGVGARFGTTIVSKEKNANQIRLTLSDPRDCCSAPKHKLDRDVIMVHRGHCKFTTK
ANNAEAAGASAVLIINNQKELYKMVCEPDETDLDIHIPAIILPQDAGASLEKMLLTNTSV
SVQLYSPKRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAAEQDKLLKDAVDEVPNDK
AVGVSSVLDINTASAVLFVVIASCFLVILYELMSYWFIELLVVLFCIGGVEGLQTCLVAL
LSRWFKHAGESYIKVPFFGALSYLTLAVSPFCIAFAAGWAMHRNLSFAWIGQDTLGIALI
ITVLQIVHVPNLKVGTVLLSCAFLYDIFWVFVSKKLFHESVMIVVARGDRSGEDGIPMLL
KIPRLFDPWGGYSIIGFGDILLPGLLIAFSLRYDWSANKSLCAGYFPWAMLAYGLGLLVT
YVALNLMDGHGQPALLYIVPFTLGTFLTLGKKRGDLRVLWTQGEPKRPCPHVLLQRSQEM
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaaaaactgtgctctataatcactataacaggtgtgattttactggtgtgt
cacccatcttcagttacagcaggagatatagtccatgatgataacttagctcccaaaaag
cctggctgtgaaaatgacttcgttttggtaaaagttcaaacttgggtcggtggagaagag
gatgctgaatttgtaggcgtgggtgctagatttggcactaccattgtgtcaaaagagaaa
aatgcaaaccaaattcgccttacactttcagaccctcgagattgttgtagtgcacctaag
cacaagcttgatagagatgtcatcatggttcaccgaggtcactgcaagttcacaaccaaa
gcaaataatgctgaagctgctggtgcttcagctgtgctcattataaataaccaaaaagaa
ctttacaagatggtctgtgagccagatgaaactgatctagatatacacatacctgctatt
atactcccacaagatgccggtgcaagcttggaaaaaatgctattgactaatacatcagtg
tctgtgcagctttactctccaaagcgaccattagttgatgtcgccgaagtctttttgtgg
ttaatggctgttggtaccatcttgtgcgcgtcttattggtccgcgtggactgccagagaa
gcagctgccgaacaggacaagctattgaaggatgctgtggatgaagttccaaatgacaaa
gctgtgggtgttagtagtgttctggacatcaatacagcatcagctgtcctgtttgttgtc
attgcttcatgcttcctggtcatactttacgaactcatgtcatattggttcattgagctt
ttggtggtcctgttctgcataggtggtgtggagggcttgcaaacttgcctggttgcttta
ttgtcaaggtggttcaagcatgctggagaatcatacataaaagtaccattctttggagct
ctctcgtacctaacgttagctgtttctccattctgcatagcatttgcagctggttgggct
atgcatcgcaatctctcctttgcctggataggtcaagatacacttggaattgcactgata
atcactgttctgcaaattgtccatgtacctaatctcaaggtgggtactgttctgctcagt
tgtgcgttcttgtatgacatcttttgggtgtttgtttccaagaagttgttccatgaaagc
gtcatgattgtggtggctcgtggtgatagaagtggagaggatggtatcccaatgctgtta
aagattccacgcttgtttgatccttggggtggttacagcatcatagggtttggcgacatc
cttttacctgggttgctgatagcattttccctcaggtatgattggtcagcaaataagagc
ctttgtgctgggtacttcccatgggcaatgcttgcttacggattaggtcttctcgttact
tatgtggcactgaacttgatggatggccatgggcagccagcactgctatatatcgtccca
ttcacccttggaacttttcttacgttagggaagaaaagaggggatctcagagtcttatgg
acacaaggagaaccaaaaagaccatgcccccatgtccttctccaacgtagtcaagaaatg
gactag
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