Populus trichocarpa (black cottonwood): 7479337
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Entry
7479337 CDS
T01077
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7479337
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
7479337
Peptidases and inhibitors [BR:
pop01002
]
Serine peptidases
Family S54: Rhomboid family
7479337
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DUF1097
DER1
EMC6_arch
Motif
Other DBs
NCBI-GeneID:
7479337
NCBI-ProteinID:
XP_002298056
UniProt:
B9GKM2
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All DBs
Position
1:8762730..8765806
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AA seq
322 aa
AA seq
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MTSGDLERGTKNRGNSSNFPSYYVETAEKQWTSWLIPMFVVANIVVFIVVMYVNDCPKKN
LGSERSCVAKFLGRFSFQPLKENPLFGPSSATLEKMGALEWNKIVRGDQGWRLITCMWLH
AGVIHVLANMLSLVFIGIRLEQQFGFVRVGLIYLVSGFGGSIFSSLFIQRNISVGASGAL
FGLLGAMLSELLTNWTIYSNKIAALLTLMVIIAINLAVGILPHVDNFAHIGGFFTGFLLG
FVLLLRPQFGWVESQHFRADAHVKSKHKAYQYMFLLAAAVLLIVGFTFGLVMLFKGENGN
DHCSWCHYLSCVPTSKWKCENR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtggggatctagagagagggacaaagaacagaggaaatagctcaaatttccct
tcatactatgttgaaacagcagagaagcaatggacttcttggctaattcccatgtttgtt
gttgccaacattgttgtttttattgttgtcatgtatgtcaacgattgtcctaaaaaaaat
ctcggttctgaacgtagttgtgtggctaagttccttggcaggttctcttttcagccgttg
aaggagaaccctctgtttggcccgtcttctgctacattggaaaaaatgggagctcttgag
tggaacaaaatagtgcgtggagatcaaggatggagactcatcacttgtatgtggttgcat
gccggtgttattcatgtgcttgcaaatatgttgagcttggtgtttattgggattcgcctt
gaacagcagtttggatttgtgcgagttgggcttatctacctagtatcaggatttggtggg
agcatcttttcttcactttttattcagcgaaacatttctgttggtgcatctggtgctttg
tttggacttcttggagcaatgctatcggagcttcttaccaactggacgatctattctaat
aagattgctgctctcctcactctcatggtcatcatcgccattaacttagcggtgggaatt
cttccacatgttgacaacttcgcacacattggaggtttctttactggttttctccttggc
tttgttttgctacttcggccacagtttggatgggtagaaagccagcattttcgtgcagat
gctcatgtaaaatccaagcacaaggcttaccaatacatgttcttgctggctgctgcagtc
ttgcttattgttgggtttactttcggattggtaatgctgtttaaaggagagaatgggaat
gatcactgcagttggtgccattacctaagctgtgtgcctacttcaaaatggaagtgcgag
aaccgatga
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