Populus trichocarpa (black cottonwood): 7479340
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Entry
7479340 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7479340 isoform X1
KO
K05293
GPI-anchor transamidase subunit U
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
7479340
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GFIT
Motif
Pfam:
PIG-U
Motif
Other DBs
NCBI-GeneID:
7479340
NCBI-ProteinID:
XP_002299558
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Position
1:complement(8802796..8808453)
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AA seq
467 aa
AA seq
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MEKKKKRGFWRWLIASVMLRLILIYLPKTFNLASRPEVSTPLVSLRRLAEGYWLKQSSIS
PYAGSMYHGSPLLLSLLGPLTVKRIEGQPNHLLCSLVFVIADIISALLIRATGHTLQMAY
RQSLNSLDIVDLLKSSDLLSSGDIAALVYLWNPFTIAACVGLSTSPVENLVVILALHGAC
KGLVPLAAFGWVMSTHLSLYPAILIIPVILLLGYGPDTPPRKLFLQKGYGKNGDNHSSDN
CGQQETNQSKAEVTFSWRPVIHFLFWSSLWSAYVLVLCSISVKPHGSLWEMFQRTYGFIL
TMEDMSPNIGVLWYFFAEVFDFFRSFFMIVFHLNILFMILPLAIRLKHRPCFLAFIYIAI
SSMLKSYPSVGDSALYLGLLGLFLDELADMKFSFFLLFGYIGVSLLSPVMHNLWIWRGTG
NANFYYATGMAYACLQIILVVESVSAVLNHDRKLRKLSVTKLRDGNS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaagaagaagagaggattttggagatggttaatagcatccgtaatgttaagg
ctgattctaatttacctccctaaaaccttcaacttagcctctcgccccgaagtctccact
cctctcgtcagcctccgccgcctggctgaaggttactggttgaagcaatcatcaatctct
ccttatgctggatcgatgtaccatggatctccattgttactctcacttcttggtccactc
actgttaaaagaattgaagggcaacctaatcatcttctttgcagtttggtttttgtcatt
gcagatattattagtgctttgcttattcgggctaccggccacactctacagatggcatat
agacagagcttaaattcacttgacattgttgatctattaaaaagttcagatttactttct
tctggagatattgctgcacttgtatacttatggaatcctttcacgatagctgcatgtgtg
ggtttatcaacttccccagttgaaaatctggttgtcatactggcacttcatggtgcttgt
aaaggactagttcctctggcagcatttggatgggttatgtcgacacacttgtctctttat
cctgcaatcctaataattccagtgattcttttgttgggatatggtcctgatactccaccc
agaaagctgttcctgcagaagggatatggtaaaaatggagataaccactcaagtgataac
tgtggtcaacaagagaccaaccaatcaaaggcagaagttacattttcatggcgaccagtc
atacatttcttattttggagttctctgtggtccgcctatgttctggttctatgcagtata
tctgttaaaccacatggtagtctgtgggagatgtttcaaagaacatatggattcattctc
acaatggaagatatgtcaccaaatattggtgttctgtggtacttctttgctgaagtgttt
gatttcttcagaagtttctttatgatagttttccacctgaatattttgtttatgatattg
ccattagccatacggctaaagcaccggccctgctttttggctttcatctacattgcaatc
tcttcaatgctcaaatcctatccgtcagttggagattcagctctatacctgggtttgttg
ggtttgtttcttgatgaattagcagatatgaagttctctttcttcctcttatttggatat
attggagtgtcccttcttagccctgtgatgcacaatctatggatttggagggggacaggc
aatgcaaacttctactatgcaactggtatggcatatgcatgcttgcagattattttggtg
gttgagagtgtaagcgctgtgctcaaccatgacaggaagcttagaaagttatctgtgaca
aagcttcgagatgggaactcttaa
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