Populus trichocarpa (black cottonwood): 7479477
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Entry
7479477 CDS
T01077
Name
(RefSeq) syntaxin-121
KO
K08486
syntaxin 1B/2/3
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7479477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7479477
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7479477
Membrane trafficking [BR:
pop04131
]
SNARE
Syntaxin (Qa)
Stx-PM
7479477
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
7479477
Exosomal proteins of other body fluids (saliva and urine)
7479477
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
PigL_N
NPV_P10
MutS_III
T2SSF
ATG17_like
DUF5790
Synaptobrevin
COG5_N
COG2p_C
TMPIT
Syntaxin_2
PRA-PH
Motif
Other DBs
NCBI-GeneID:
7479477
NCBI-ProteinID:
XP_002308326
UniProt:
B9H9L1
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All DBs
Position
6:complement(20953058..20955332)
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AA seq
306 aa
AA seq
DB search
MNDLFSGSFSRFHSEEASPDHHVIQMSEAQSTGGGVNLDKFFEDVESIKDELKELERLNE
NMRSSHEQSKTLHNARAVKDMRSKMDADVALALKRAKLIKVRLEALDRSNAANRSLPGCG
PGSSSDRTRTSVVSGLRKKLKDLMESFNGLRQKITTEYRETVERRYFTVTGENPDEKTLD
LLISTGESETFLQKAIQQQGRGRILDTINEIQERHDAVKDLENNLKELHQVFMDMAVLVE
HQGEQLDDIESHVQRANSYVRGGTQQLQTARKLQRNSRKWTCYAIIILLIIILVVLLSVR
PWEKKK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacctcttttccggctccttctctcgcttccacagcgaagaagcctccccggat
caccatgtaattcagatgtccgaagcgcagtccaccggcggtggggttaaccttgacaag
ttctttgaagatgtagagtcgatcaaagatgagctcaaggagttggaaagacttaatgag
aatatgcggtcttcacatgagcaaagtaagactctgcacaacgcgagggctgtcaaggac
atgaggtccaagatggatgctgatgttgctctggcgttgaaaagggcaaagctgatcaag
gtccggttagaggccttggaccggtctaatgcagcgaaccggagtcttcctgggtgtgga
ccggggtcttcttcggataggactaggacttcggtggtgagtgggttgaggaagaagttg
aaggatttgatggagagttttaatgggttgagacagaagataaccacggagtatagagag
actgtggagagaaggtattttactgtgactggtgaaaatcctgatgagaagactcttgat
ctgttgatctctacaggtgagagtgagacatttctccagaaagcaattcaacaacagggg
agaggcaggattttggacacgataaatgaaattcaggaaaggcatgatgctgtgaaagat
ttggaaaacaatctaaaggagcttcaccaagtgtttatggacatggcagtattggttgaa
catcaaggcgaacaattggatgacattgagagccatgtgcaaagagctaattcttatgtg
cggggcggcacccagcagctgcagactgccaggaaactacagagaaattccaggaaatgg
acttgttatgccattattatattgctgatcatcatattggtggtgctcctctctgtgcgg
ccgtgggagaaaaagaagtga
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integrated database retrieval system