KEGG   Populus trichocarpa (black cottonwood): 7479477
Entry
7479477           CDS       T01077                                 
Name
(RefSeq) syntaxin-121
  KO
K08486  syntaxin 1B/2/3
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    7479477
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7479477
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7479477
Membrane trafficking [BR:pop04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    7479477
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   7479477
  Exosomal proteins of other body fluids (saliva and urine)
   7479477
SSDB
Motif
Pfam: Syntaxin SNARE PigL_N NPV_P10 MutS_III T2SSF ATG17_like DUF5790 Synaptobrevin COG5_N COG2p_C TMPIT Syntaxin_2 PRA-PH
Other DBs
NCBI-GeneID: 7479477
NCBI-ProteinID: XP_002308326
UniProt: B9H9L1
LinkDB
Position
6:complement(20953058..20955332)
AA seq 306 aa
MNDLFSGSFSRFHSEEASPDHHVIQMSEAQSTGGGVNLDKFFEDVESIKDELKELERLNE
NMRSSHEQSKTLHNARAVKDMRSKMDADVALALKRAKLIKVRLEALDRSNAANRSLPGCG
PGSSSDRTRTSVVSGLRKKLKDLMESFNGLRQKITTEYRETVERRYFTVTGENPDEKTLD
LLISTGESETFLQKAIQQQGRGRILDTINEIQERHDAVKDLENNLKELHQVFMDMAVLVE
HQGEQLDDIESHVQRANSYVRGGTQQLQTARKLQRNSRKWTCYAIIILLIIILVVLLSVR
PWEKKK
NT seq 921 nt   +upstreamnt  +downstreamnt
atgaatgacctcttttccggctccttctctcgcttccacagcgaagaagcctccccggat
caccatgtaattcagatgtccgaagcgcagtccaccggcggtggggttaaccttgacaag
ttctttgaagatgtagagtcgatcaaagatgagctcaaggagttggaaagacttaatgag
aatatgcggtcttcacatgagcaaagtaagactctgcacaacgcgagggctgtcaaggac
atgaggtccaagatggatgctgatgttgctctggcgttgaaaagggcaaagctgatcaag
gtccggttagaggccttggaccggtctaatgcagcgaaccggagtcttcctgggtgtgga
ccggggtcttcttcggataggactaggacttcggtggtgagtgggttgaggaagaagttg
aaggatttgatggagagttttaatgggttgagacagaagataaccacggagtatagagag
actgtggagagaaggtattttactgtgactggtgaaaatcctgatgagaagactcttgat
ctgttgatctctacaggtgagagtgagacatttctccagaaagcaattcaacaacagggg
agaggcaggattttggacacgataaatgaaattcaggaaaggcatgatgctgtgaaagat
ttggaaaacaatctaaaggagcttcaccaagtgtttatggacatggcagtattggttgaa
catcaaggcgaacaattggatgacattgagagccatgtgcaaagagctaattcttatgtg
cggggcggcacccagcagctgcagactgccaggaaactacagagaaattccaggaaatgg
acttgttatgccattattatattgctgatcatcatattggtggtgctcctctctgtgcgg
ccgtgggagaaaaagaagtga

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