Populus trichocarpa (black cottonwood): 7479486
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Entry
7479486 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7479486
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7479486
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7479486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
7479486
NCBI-ProteinID:
XP_002309263
UniProt:
B9H9M7
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All DBs
Position
6:20782090..20786585
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AA seq
389 aa
AA seq
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MEVLEVDEAKKPEVHMTSAAAFVEGGIQESCDDACSICLEDFCESDPSTVTNCKHEFHLQ
CILEWCQRSSECPMCLRSISLKDPTSQELFEAVERERKIRAAPSRNATIFHHPTLGDFEL
QHLPVGVSDSELEERIIQHLAAAAAMGRTGHFGRGGGQRNRSSPHGRPHFLVFSTHPGAQ
PSGHVSSSLSQLGRENEPAAGSVASPSTPLTSVEDEPSQQTLQLPPILTDQSSSASGSTV
MRQGLSFNNRSTSSQSAPPNQDRAGPSEFQSFSVSLKSRLNAVSMRYKESISRSTRGWKD
RLFSRNSSVSDLGSEVRRDVNAGIATVSRMMERLETRDNSGANQVSVSTHWTDRPAAERS
NQNNAETHIESPVNEGSTPVSCAASSAST
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaggttctggaggtggatgaagcaaagaaacctgaagttcatatgacatcagctgcg
gcatttgtggaaggggggatccaggaatcatgtgatgatgcatgtagcatttgcctcgaa
gatttttgtgaaagtgatccctcaacggtcactaattgcaagcatgagttccatcttcag
tgtatccttgaatggtgtcagagaagctctgagtgtccaatgtgtttgcgatccatcagt
cttaaagatcccaccagtcaagaattgtttgaggctgtagaacgggagaggaaaatcaga
gctgctccatcaagaaatgctactatttttcatcatcctacgcttggggatttcgaattg
cagcatctaccagttggtgtaagtgattctgaacttgaggagcgtataatccagcacctg
gctgctgctgctgctatgggaaggaccggccactttggcagggggggagggcagagaaac
aggtcatctccccatggtcgtccacacttcttggtattttctactcatcctggtgcacag
ccttctggtcatgtttcatcctctctgtctcagctgggcagggaaaatgaaccagcagca
ggctctgtagctagcccatccacaccactcacttctgttgaggatgaaccatcgcaacaa
accttacaattgcctcctattttaactgatcaaagttcctctgcatctggatccacagtg
atgcgccaaggactttcctttaataaccggagcacttctagtcagtctgcaccgccaaat
caagatagagcagggccatcagaattccagtcattttcagtctccctgaaatctaggctt
aatgcagtttcaatgaggtataaagagtcaatttcaagaagtacaagagggtggaaggat
aggctgttttctcgtaacagttcagtgtctgatcttggctctgaagttcgaagagatgta
aatgcaggaattgcaactgtatctcgtatgatggagcgccttgaaaccagagataacagt
ggagccaaccaagtttctgtatcaactcattggactgatcgtccagctgctgagaggagc
aaccagaataatgctgagactcacatagagagccctgtaaatgaaggaagtacgccagtt
tcttgtgctgcaagttcagcatctacttaa
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