Populus trichocarpa (black cottonwood): 7479540
Help
Entry
7479540 CDS
T01077
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic
KO
K03768
peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:
5.2.1.8
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7479540
Enzymes [BR:
pop01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
7479540
Chaperones and folding catalysts [BR:
pop03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
7479540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
7479540
NCBI-ProteinID:
XP_002309317
UniProt:
B9HAP1
LinkDB
All DBs
Position
6:19680778..19684444
Genome browser
AA seq
288 aa
AA seq
DB search
MNSPLTPPPPPPLLPHHHIPSLLSSTTITRRSLLLSTSLSTLSPPRPTLDTTITDRVFLD
FSICSNYFRPDRTLSDTFSTLCTDSTPLGRLVLGLYGHLVPLTVSNFKTMCTSYSYKNTL
VHKIFPGQFFLAGRQGRREKGEVKVPQDLARNIESVDSKAFKLTHSGPGILSLCLSENDD
EDNIKLNPEYRNVEFLITTGPGPCPQLDYKNIVFGVVLEGLDVVTSIASIPTYKPSDRIR
QFNDLAEFLGDERAQNARTIWNKPLKTVYISDCGELKVAKPSLTPSLP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccctctaacccctccaccaccaccacctctcctccctcaccaccacatccct
tctctcctctcttctaccaccatcacccgccgctccctcctactctccacctccctctcc
actctctctccacctcgaccaacccttgacaccactataacagaccgtgtctttcttgac
ttctccatctgctccaattacttccgcccagaccggaccctctccgacaccttctccacc
ctctgcaccgactcaactcccctagggcgcctagttcttggcctctatggccatttggtc
cctctcactgtctccaacttcaaaacaatgtgcacttcatactcttacaagaacactcta
gtccataaaatctttccgggtcagttttttcttgcgggccggcaaggaaggagagaaaaa
ggagaggtgaaagtgcctcaagatttggcaagaaatatcgagagtgttgattctaaggct
tttaagctaacacattcaggacctgggattctttctttgtgtttatcagagaatgatgat
gaggataatattaagcttaatcctgaatacaggaatgttgagttcttgattactactgga
cctggtccttgccctcagttggattacaagaacattgtttttggagtggttcttgaaggg
ttagatgttgtgacatccatagcttccatcccgacatacaaaccatcagatagaattcgc
caattcaatgacttggcggagtttcttggtgatgaaagagcacaaaatgctcgaacaata
tggaacaagcctcttaagactgtctatatcagtgactgcggagagctgaaagttgcaaag
ccctctcttactcctagcttaccgtag
DBGET
integrated database retrieval system
