Populus trichocarpa (black cottonwood): 7479608
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Entry
7479608 CDS
T01077
Name
(RefSeq) probable UDP-arabinose 4-epimerase 3 isoform X1
KO
K12448
UDP-arabinose 4-epimerase [EC:
5.1.3.5
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00520
Amino sugar and nucleotide sugar metabolism
pop01100
Metabolic pathways
pop01250
Biosynthesis of nucleotide sugars
Module
pop_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
7479608
Enzymes [BR:
pop01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.5 UDP-arabinose 4-epimerase
7479608
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
Methyltransf_25
adh_short
NmrA
KR
DAO
Motif
Other DBs
NCBI-GeneID:
7479608
NCBI-ProteinID:
XP_002307918
UniProt:
B9HDE4
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All DBs
Position
6:1492537..1496786
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AA seq
390 aa
AA seq
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MDFLDSRRKSNSAGKVIAVAFFIAVCIVMLKQVYSPSYTSPDMFSQHELGVTHVLVTGGA
GYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLGDAKAVNK
IFAENAFDAVMHFAAVAYVGESTIEPLRYYHNITSNTLVVLEAMAAHNVKTLIYSSTCAT
YGEPIKMPIREETPQLPINPYGKAKKMAEDIIIDFSNTTDMAVMILRYFNVIGSDPEGRL
GEAPRPELREHGRISGACFDAARGITPGLKVKGTDYKTADGTCVRDYIDVTDLVDAHVKA
LAHAKPRKVGIYNVGTGKGRSVKEFVDACKKATGVDIKVEYLDRRPGDYAEVFSDPSKIK
QELSWTAQYTDLQKSLQIAWKWQKSHLNGY
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctggattcaagaagaaagagcaattctgctggaaaagttattgcagttgca
ttcttcattgcagtatgcattgtcatgctcaagcaagtgtactcacctagttataccagc
cccgacatgttctcccaacatgagctaggcgtaacgcatgtgttggtgaccggaggtgct
ggttacataggttctcacgctgcacttcgactcttgaaggattcataccgagtaactata
gtggacaatctctctcgagggaatctcggtgcggttaaagttcttcaagagctatttcca
gagcctgggagattgcagttcatatatgctgacctaggagatgcaaaagctgtaaacaaa
atctttgccgaaaatgcatttgatgctgtgatgcattttgctgctgttgcatatgttggt
gaaagtacaatagagccccttagatattatcacaatatcacatcaaataccttggttgtc
ttggaagcaatggctgcacataatgtgaagacattaatctattcgagcacttgtgcaacg
tacggagaacctattaagatgccgattagagaagaaactcctcagcttccaatcaacccc
tatggaaaagccaagaaaatggcagaagatatcataattgacttctccaacaccactgac
atggctgtcatgatcctaagatacttcaatgttattgggtctgacccggaaggaagatta
ggggaagctccacgacctgagcttcgtgagcatggccgaatctctggtgcttgttttgat
gcagctcgagggataacacctggactcaaggttaaagggacagactataaaacagctgat
ggcacatgtgtacgcgactatatcgatgtcactgacctggttgatgcccatgtgaaagct
cttgcccacgcaaaacctcggaaagttggcatttacaatgttggaactggaaaaggcaga
tcagtgaaggagtttgttgatgcgtgtaagaaggcaacaggcgtggacataaaggttgaa
taccttgatcgccggccaggagactatgctgaggtcttcagtgatccttccaaaataaaa
caagagctaagctggacagctcaatatactgaccttcagaagagtttacagattgcttgg
aaatggcagaagtcacatttgaatggttattga
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