Populus trichocarpa (black cottonwood): 7479683
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Entry
7479683 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7479683 isoform X1
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7479683
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
7479683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gcd10p
Motif
Other DBs
NCBI-GeneID:
7479683
NCBI-ProteinID:
XP_024449868
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All DBs
Position
2:1450657..1455488
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AA seq
489 aa
AA seq
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MPPSKISNKISRCLNAPLRQIQAIESTNSVALFCILSILKNHNKGPNMSQNSIQSNSIQN
PRVTWEGCSVLLDINDGDRLVFARLTAGSTLKIGNKNFSLRPLIGCPFGSSFQIENGTEG
LCLCRFVPSTEVDNNDQEKGGSQIMDECRDNRAIVDNNEAQTLTSGDIDEMRRQGVKGDE
IIEALIANSATYEKKTTFSQEKYRIKKQKKYAPRVLLRRPSARSICEAYFKKYPHRIGFL
RVDALSLLLSLANVTANSDILLVDMVGGLLTGAVAERLGAGTGYVCNTYLGSTPYPVEIV
RTFNFDNEICKRIVRAPLRDLCLDQIGTSEIIDASNAELNGQTSINMEEMSLPSNHEAVD
SETIVSPQSKMGKPPKAGEKASEEAIKSWKENGFSSLIIAAPDADAWSLAKDLLPLLSYS
APFAIYHQYLQPLATCMHNLQQGKMAIGLQISEPWLREYQVLPSRTHPLMQMSAFGGYIL
SGTKICSSS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcccccttcgaaaatttcgaataaaatcagtcgctgcttgaatgctccactgcggcaa
attcaagcaatagagagtaccaattctgttgctttgttctgtattctttcaattcttaaa
aatcacaataaggggccaaacatgtcccaaaatagcatccagtcaaattcaattcaaaac
cctagagtaacctgggaaggttgcagtgtcttgctcgacattaacgacggcgaccgcctt
gtttttgctcgattaacagctggctcgacattgaaaattggaaataagaatttctcttta
cggcccttgattggatgccccttcggttcttcttttcaaattgagaatgggactgaaggg
ctttgtttatgtaggtttgttccttccacagaagtagataataatgatcaagaaaaagga
ggatctcaaataatggacgaatgtagggataatcgagctattgttgataataatgaagcc
cagaccctaactagtggagacatagatgaaatgcggaggcagggtgtgaaaggtgatgag
ataattgaagctctcattgccaatagtgcaacatatgagaaaaaaacaacattttctcaa
gagaaatataggattaagaagcaaaaaaagtatgcccctagagtacttctgaggcgacct
tctgctagaagcatatgcgaggcgtacttcaagaaatatccacatagaatcggattcctg
cgagtagatgcattatccctgttgctttcacttgctaatgttactgcaaactctgacatc
ctgttagtggatatggttggtggccttcttactggtgctgtggcagagcgtttaggagca
ggtacaggttacgtttgcaatacatatcttggaagtacaccgtatcctgtggagatagtc
agaacattcaactttgataatgaaatctgcaaaaggattgtgcgggctcctctgcgtgac
ctctgtttagaccaaattggaacatccgagataattgatgccagcaatgcagaattaaat
ggccaaacctccatcaacatggaagaaatgtctcttccatccaaccacgaggctgtggat
tcagagactattgtctctccacaaagtaaaatgggcaaaccccctaaagctggcgaaaag
gcatcagaagaagccattaagtcatggaaggaaaatgggttctctagtctaataattgct
gcgccagatgcagatgcttggagcttagccaaggatctactgccacttctatcatattca
gcaccatttgctatctaccaccagtatcttcagccacttgcaacatgcatgcacaattta
cagcaggggaaaatggcaattggtttgcaaatttcagaaccttggctacgtgaatatcag
gttcttccatcaagaactcatccattgatgcagatgagtgcctttgggggttacattctc
agtgggaccaagatatgtagcagtagctaa
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