Populus trichocarpa (black cottonwood): 7479861
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Entry
7479861 CDS
T01077
Name
(RefSeq) ras-related protein RABF1
KO
K07887
Ras-related protein Rab-5A
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
pop04145
Phagosome
pop04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7479861
04145 Phagosome
7479861
04148 Efferocytosis
7479861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7479861
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7479861
04031 GTP-binding proteins [BR:
pop04031
]
7479861
Membrane trafficking [BR:
pop04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
7479861
Endosome - Lysosome transport
7479861
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7479861
Exosomal proteins of other body fluids (saliva and urine)
7479861
Exosomal proteins of colorectal cancer cells
7479861
Exosomal proteins of bladder cancer cells
7479861
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
7479861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
AAA_7
AAA_16
Motif
Other DBs
NCBI-GeneID:
7479861
NCBI-ProteinID:
XP_002311076
UniProt:
B9HLH6
LinkDB
All DBs
Position
8:1955731..1959839
Genome browser
AA seq
201 aa
AA seq
DB search
MGCSSSLPDRSTGRLGGLNNSESGGVVDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP
TSKVTIGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPE
TFNKAQYWVKELQKHGSPDIVMALVGNKADLQEKREVPTQDGIDYAEKNGMFFMETSAKT
ADNINQLFEEIAKRLPRPSST
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgggttgctcctcttctcttccagatagaagtactgggaggttgggcggacttaacaat
tcagagagtggtggagtggttgatgccaaaaacctacgtgtgaagttggttttgttaggg
gattctggtgttggtaaaagctgtattgttcttcgttttgttcgtggtcagtttgatcca
acatccaaggtaactattggagcttcatttttgtcacaaacgatagcattacaagattct
acaacagttaagtttgagatatgggatactgcagggcaggaaaggtatgctgcactggca
ccactatattataggggtgctgcagttgcagttattgtttatgatataacaagcccagag
acgttcaacaaagcacaatattgggtgaaggagctacaaaaacatggtagccctgatata
gtcatggctttagttggtaacaaggctgatcttcaagagaagcgagaagtacccactcaa
gatggcattgactatgcggagaagaatgggatgttctttatggagacatctgcaaaaact
gcagataatataaatcaactgtttgaggaaattgctaagcgacttccacgaccttcctca
acttga
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