Populus trichocarpa (black cottonwood): 7479879
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Entry
7479879 CDS
T01077
Name
(RefSeq) synaptotagmin-3 isoform X1
KO
K28063
extended synaptotagmin
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7479879
Membrane trafficking [BR:
pop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
7479879
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Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
DUF4861
CEP76-C2
Motif
Other DBs
NCBI-GeneID:
7479879
NCBI-ProteinID:
XP_002311084
UniProt:
B9HLK1
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Position
8:2109156..2114082
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AA seq
547 aa
AA seq
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MGFLNTLVELLGFGIGLPFGLLIGFFLFVYSKPKDTVKDPVVRPLHELDTGALLDILPDI
PLWVKCPDYERVDWLNKFLSDMWPYLDKAVCAMIRRTTQSMFAEYIGKYKIQAIEFEHLT
LGTLPPTIHGLKVYETNEKDLVMEPAIRWAGNPNIVLVLKLMSLQVTVQLVDLQIFAAPR
VALKPLVPTFPCFANILVSLMERPHVDFGLKILGGDVMSIPGLYRFVQEMIKKQVASLYL
WPQTLDIPILDSSTVIIKKPVGILHVKVVRAKKLLKADLLGTSDPYVKLNLTGEKLPAKK
TTIKKKNLNPEWNENFKLVVKDPESQALQLQVFDWDKVGGHDRLGMQLVPLKVLTPRETK
DFTLDLLKHTNISDSRDKKQRGQIVVELTYVPFREDSIKFSGPLDGNGEMGSVSGRSTPE
EAPLSGAGLLSVMVQGAEDVEGKRHHNPYALVLFRGERKRTKTIKKTRDPRWNEEFQFTL
DQPPLHELIRIEVMSKRKSFSFRSKESLGHVEINLDDVVYNGRINQKYHLIDSRNGVIHV
EIRWSTV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgggattcttgaatactctcgtggaacttcttggttttggaattggacttccttttggt
ctcttgattggtttctttcttttcgtttattctaagcctaaagatactgtcaaggatcca
gtggtcagaccacttcatgagttagacacaggtgctttgctagatattctaccagatatt
ccattatgggtaaaatgccctgattatgaaagagttgactggttgaacaagtttctctcg
gatatgtggccctaccttgataaggcagtttgtgcaatgataagaaggacaacacaatct
atgtttgcagagtatattgggaaatataagatacaagccatcgagtttgagcatttaact
cttggaactcttcctcctacaattcacggtctcaaagtctacgaaactaatgagaaggat
ttagtaatggaaccagcaataaggtgggctggcaatcccaacattgttttggtgcttaaa
ttaatgtccttgcaggttacagttcagttagttgatctgcagatatttgcagcgcctcgg
gtagctttgaaacctcttgtgcctacctttccatgttttgcaaatattttggtgtccttg
atggagaggccacatgttgattttggactgaaaatcctgggaggagatgttatgtccata
cctggcctttatcgatttgttcaggagatgataaaaaaacaggtagcaagcctctactta
tggccccaaactctcgacatacctatccttgattcttcaacagtaattattaagaagcct
gtggggatacttcatgtgaaagttgtgcgggcaaaaaaactcctgaaggctgatctcctc
ggaacatctgatccatatgtgaaacttaaccttactggagagaagcttccagcaaagaaa
acgacaatcaagaagaagaatctgaatcctgaatggaatgagaacttcaagcttgttgtc
aaggatcctgaatcccaagctcttcaactacaagtgtttgactgggacaaggttggtggg
catgacagattagggatgcaattagttcccctgaaagtgcttactccccgtgaaacgaag
gacttcactcttgatttgctcaagcacacaaatatttccgactctcgggacaagaaacag
cgaggacagattgtggtggagttgacctatgtgccttttagagaagatagtatcaagttt
agcggacctttggatggaaatggtgagatgggaagtgtaagtggcaggtctactccagaa
gaagcaccattgagtggagcaggtttactctcagttatggttcaaggagctgaggatgta
gaagggaagcgtcaccataatccctatgctttagtccttttcagaggagaaaggaagaga
actaagacgataaaaaagactcgtgatcctcgttggaacgaagagttccaattcacgctg
gatcaacctcccttgcacgagttgattcgtattgaggtcatgagcaagcgaaaaagcttt
agtttccgatcaaaggaatcgttggggcatgtggaaatcaatcttgatgatgttgtgtac
aacggacgcatcaaccagaaataccatctaattgattcgaggaatggagtgatacatgtt
gagattagatggagtacagtttga
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