Populus trichocarpa (black cottonwood): 7479880
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Entry
7479880 CDS
T01077
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00510
N-Glycan biosynthesis
pop00513
Various types of N-glycan biosynthesis
pop01100
Metabolic pathways
pop04141
Protein processing in endoplasmic reticulum
Module
pop_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
7479880
00513 Various types of N-glycan biosynthesis
7479880
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7479880
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Gene cluster
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Motif
Pfam:
Ribophorin_I
Motif
Other DBs
NCBI-GeneID:
7479880
NCBI-ProteinID:
XP_002311086
UniProt:
B9HLK4
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Position
8:2137620..2141572
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AA seq
469 aa
AA seq
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MASSTSMEAAGLTLPFLILTFLTISAASSTNQIQILNAERRIDLSSHIVKVFLTLKVENV
GTTPASEIVLAFAPAQADHLALVKAQAAIGKKKKKSYVHLDVNPTELPDAPNGTKYFSIS
LLNPLSSGETATLEVLYILTHSLEPFPAEISQSESQLVYFRDSALILSPYHVKQQTTFLK
TPSTKVESFTRVEPTKLAGRELKYGPYEDHPPYSFSPVIVHLENNSPFAVVEELLREVEI
SHWGNLQITEHYKLVHAGARHKGVFSRVEYQSRPSFSGTSSFKHLLASLPPRVHSVYYRD
DIGNISSSHLRSDNRKSELEIEPRYPLFGGWKATFVIGYGLPLEDFLFESPDGKRYLNFS
FGCPLAETVVDKLTIKVVLPEGSKDPSAVVPFPVEQRLETKYSYLDVVGRTVLVLENKNV
VPEHITPFQVYYTFKPIFMLAEPLMLASVFFLFFMACLAYLHIDLSIRK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttcaacatccatggaagcagcgggactcactctacctttcttgatcctcaca
tttctcacaatttccgctgcatcctcaactaaccagatccaaatccttaacgctgaacgt
agaattgacttgagttcacatattgttaaggtcttcttgactttaaaggttgagaatgtc
gggacaacccctgcttcagaaatcgttcttgcatttgcacctgctcaagctgatcatcta
gcacttgtcaaagcacaagcagctataggcaagaagaagaagaaaagttatgttcatctt
gatgtaaacccaacagagctacccgatgcgccaaatggaactaaatatttcagtatatct
ttgcttaatccgttaagttcaggtgaaactgcaactctggaagtgctttatatattaaca
cattctctggaacctttcccagcagagataagccaatcggaatcacaattagtatatttc
cgtgacagcgcattaatactgtcaccatatcatgttaagcagcaaactacttttcttaag
acaccaagtacaaaagtggaatcatttacaagagtggaacccaccaagcttgctggtaga
gaactaaagtatggaccatatgaagatcatcctccatattcattttctccagtaattgtt
catcttgagaataacagcccatttgctgttgttgaagagcttttaagagaagtagagata
tctcactggggcaaccttcaaataacagagcattacaaattggtccatgctggtgctcga
cacaaaggcgtgttttccagagttgagtatcaatctaggccatcttttagtggcacatct
tccttcaaacaccttctagcaagtctaccacctagggtgcactctgtgtattatcgggat
gacattggaaacatctcatcatcacatttacgttcagataaccgtaagtcggaacttgaa
atcgaaccacggtatcctttatttggaggttggaaggctacttttgttattggatatggg
ctaccactggaagacttcctttttgagtcacctgatggcaagcgttacctcaacttcagc
ttcggctgtcctcttgcagagactgttgtggacaagttgaccatcaaagttgtgctacca
gagggatcaaaagacccttcagctgttgttccttttccagtggagcagcgtctagagacc
aaatattcataccttgatgttgttgggaggaccgttctggttctggagaataaaaatgta
gttcctgagcacattactcctttccaggtttactacactttcaaacctatatttatgcta
gcagaaccattgatgttggcatctgtatttttcttgtttttcatggcttgtttagcttat
ctacacattgatctttccatacgcaagtaa
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