Populus trichocarpa (black cottonwood): 7480015
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Entry
7480015 CDS
T01077
Name
(RefSeq) protein indeterminate-domain 12
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7480015
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
7480015
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
DUF7128
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
7480015
NCBI-ProteinID:
XP_002302090
UniProt:
B9GSI6
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Position
2:complement(3181599..3186068)
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AA seq
472 aa
AA seq
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MFPAAMSNSTSLSEEASVSSGTRIQDFGSLNQLASTISPLQQQQQQQQRTIKKKRNLPGN
PDPDAEVIALSPKTLLTTNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNSKEIKKK
AYVCPEPTCVHHHPSRALGDLTGIKKHYCRKHGEKKWKCEKCSKIYAVQSDWKAHSKTCG
TREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSAHQLIISQNPNAHALLLQNPLQTH
HPHSLFSTTAHHQISFTSPWDPPHHQNPCSNNPLNPVHIKPETTGHFQIPASLLQEPPLT
MPSHKGLLAPTFQSLSNAATSQAASHHLSATALLQKAASVGATQTSVGHSHMTQLDMGEL
GSAGQVHVDSVSHVSQGPSYNLNSLATWQKSDRLTRDFLGLTAPECGDHHGHAASNANGS
VNVSMNVREILTYTGGVGFHQQQYNERDHSLLKPHGGFGFAQPSASEAWGDC
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttccctgcagccatgtccaattcaacttctttgtctgaagaagctagtgtatcttct
ggcacaagaattcaagattttggtagcttaaatcaactggcttcaaccatctctcctctg
cagcagcagcagcagcaacaacaaaggaccatcaagaagaagagaaacttaccaggaaac
ccagacccagacgctgaagtgatagcattatctccaaagaccttattgaccaccaataga
tttgtgtgtgagatctgcaacaaggggtttcagagggatcagaatcttcagcttcatagg
aggggtcataaccttccttggaagctgaagcaaagaaacagcaaagaaattaaaaagaaa
gcttatgtttgccccgagcctacgtgtgttcaccatcatccttcaagggctttgggtgac
cttacaggtatcaagaaacattattgcaggaaacatggggagaagaagtggaagtgtgaa
aaatgctcaaagatctatgctgttcaatcagattggaaggctcactctaaaacctgtgga
acaagagagtacagatgtgactgtggaacccttttctccaggaaggatagcttcataacc
cacagggcattttgtgacgcgttagctgaagaaagtgcaagactctcagctcaccagcta
attatctcccaaaatccaaatgcccacgctctcctccttcaaaacccacttcaaacccac
caccctcattctctcttttctaccacagctcaccaccaaatctccttcacttctccttgg
gacccacctcaccatcagaacccttgcagtaataaccccctaaacccagttcacatcaag
cctgaaactaccggccattttcaaatccccgcttcacttctccaagaaccaccactaaca
atgcctagccacaagggcttgttagccccaaccttccaaagcctgtcgaatgctgccacg
tcacaagcagcatcacaccacttgtcagccactgcactccttcaaaaggctgccagtgtg
ggtgccactcagacctcagtgggtcacagtcacatgacccagctggacatgggcgagttg
ggatcagcgggtcaggttcatgttgactcggtgagtcacgtctctcagggtcccagttac
aaccttaacagccttgccacgtggcagaagagtgatcgcctgacaagagactttctgggt
ctgactgcgcctgagtgtggggatcatcatggccatgctgctagcaatgcgaatgggagt
gttaacgttagcatgaatgtgagggaaattctaacctatacagggggtgtagggttccac
cagcagcaatacaacgagagagaccactcgctgctgaagccccacggtggttttggattc
gctcagccttctgcctctgaagcgtggggtgattgctag
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