KEGG   Populus trichocarpa (black cottonwood): 7480065
Entry
7480065           CDS       T01077                                 
Name
(RefSeq) polyubiquitin
  KO
K08770  ubiquitin B/C
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    7480065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7480065
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7480065
Ubiquitin system [BR:pop04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   7480065
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   7480065
  Exosomal proteins of other body fluids (saliva and urine)
   7480065
  Exosomal proteins of colorectal cancer cells
   7480065
  Exosomal proteins of bladder cancer cells
   7480065
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 TBK1_ULD Dsc3_N DUF2604 Ubiquitin_5 UBL_UBAC1
Other DBs
NCBI-GeneID: 7480065
NCBI-ProteinID: XP_002299930
UniProt: B9GFB7
LinkDB
Position
1:complement(27871904..27874006)
AA seq 381 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGY
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcaaatctttgtgaaaactcttactggtaagaccatcactcttgaggttgaaagctca
gacaccattgataatgtcaaagctaagatccaggataaggaagggatccccccagatcag
caaaggttgatttttgctggcaaacaacttgaggatggacgcactcttgctgattataac
attcagaaagagtccaccctccacctagtgcttcgtctcagaggtggcatgcagatcttt
gtaaagactctcactggcaagacaattaccttggaagtggagagctcggacacaattgac
aatgtcaaggccaagatccaagataaagaaggtatccctccagaccagcagaggctcatc
tttgctgggaagcaacttgaggacggtcgcacccttgccgactataacatccagaaggag
tccaccctacacttggtgctccgacttcgaggtggcatgcagatctttgttaagactttg
actggaaagaccatcaccttggaggttgagagctctgacactattgataacgtgaaagct
aaaatccaggacaaggagggcatccccccagaccaacagaggctcatctttgctggcaag
caactggaagatggacgcactctagctgactataacattcaaaaggaatccacactccac
ctggtgcttcgacttagaggtggtatgcaaatttttgtaaagactttgactgggaagacc
atcacgttggaggtcgagagctctgacaccattgacaatgtcaaggctaaaatccaggat
aaggaaggaatcccaccagaccaacagaggcttatttttgctggtaaacaacttgaggat
ggacgtacccttgctgactacaacattcagaaggaatccaccctccacttggtgcttcga
ctgagaggcggtatgcagatttttgtcaagacactcactggaaaaaccattaccttggaa
gtcgagagctctgataccattgacaatgtcaaggccaaaattcaggataaggagggtatc
ccaccagaccagcaaaggttgatctttgctggaaagcagctggaggatggacgaactttg
gcagattacaatatccagaaggagtcgactctgcaccttgtccttcgccttcgtggtggt
tattaa

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