KEGG   Populus trichocarpa (black cottonwood): 7480106
Entry
7480106           CDS       T01077                                 
Name
(RefSeq) tubulin beta-4 chain
  KO
K07375  tubulin beta
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04145  Phagosome
pop04517  IgSF CAM signaling
pop04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pop00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    7480106
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    7480106
  09142 Cell motility
   04814 Motor proteins
    7480106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pop03036]
    7480106
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pop04812]
    7480106
   04147 Exosome [BR:pop04147]
    7480106
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     7480106
Cytoskeleton proteins [BR:pop04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    7480106
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   7480106
  Exosomal proteins of colorectal cancer cells
   7480106
  Exosomal proteins of bladder cancer cells
   7480106
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Misat_Tub_SegII Tubulin_2
Other DBs
NCBI-GeneID: 7480106
NCBI-ProteinID: XP_052310649
LinkDB
Position
1:28701215..28704354
AA seq 445 aa
MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYTGSSDLQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIPPIG
LAMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATVDEELEYEDEEEEEAA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagagaaatccttcacattcaaggaggacagtgcggtaaccaaatcggctccaagttc
tgggaggttgtttgcgctgagcatggaattgatcccactggaaaatacactggatcctct
gaccttcaattggagcgcgtcaatgtttattacaatgaggcttcatgcggacgatttgtc
cctcgcgctgtgcttatggatcttgagcctggtactatggacagtgtgaggactggtccc
tatggccagatctttaggcctgataactttgtgtttggacagtctggcgctggaaataac
tgggccaagggtcattatactgagggtgcggagttgattgattcggttcttgatgttgtg
aggaaggaggcggagaattgtgactgtcttcaaggatttcaagtttgccactcactcggt
ggaggaactggttctgggatggggactcttttgatttctaagatcagagaggaataccct
gatagaatgatgcttactttctctgtgtttccatcacctaaggtttctgatactgttgtt
gagccatacaacgcaactctctcagttcatcagttggttgagaatgctgacgagtgtatg
gtgctagataatgaggccttgtatgatatctgcttcaggactctcaagttgactactcct
agctttggtgacctgaaccatctgatctctgcaacaatgagtggggttacctgctgcctc
aggttccctggccagctgaattctgatcttaggaagcttgctgtgaaccttatccccttc
ccccgcctgcacttctttatggttggatttgctcctcttacctctcgtggctctcagcag
tacaggtcactaactgtcccagaactcacccagcagatgtgggattccaagaacatgatg
tgcgccgcagacccacgccacggtcgctatctgactgcctctgccatgttcaggggtaag
atgagcactaaagaagttgatgaacaaatgatgaatgtccaaaacaagaattcctcctac
tttgtggagtggattccaaacaatgtcaagtccagtgtgtgtgatattcctccaataggg
cttgctatggcatccaccttcattggaaactcaacctccatccaggagatgttcaggcgt
gtgagtgagcaattcacagctatgttcaggaggaaggctttcttgcactggtacaccggg
gaaggcatggatgagatggagttcaccgaggctgaaagcaacatgaatgatctcgtgtct
gaatatcagcaataccaggatgcaaccgttgatgaagaacttgagtacgaggatgaggag
gaggaagaggctgcctag

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