Populus trichocarpa (black cottonwood): 7480122
Help
Entry
7480122 CDS
T01077
Name
(RefSeq) hydroxyproline O-arabinosyltransferase PLENTY
KO
K20782
hydroxyproline O-arabinosyltransferase [EC:
2.4.2.58
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
7480122
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7480122
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.58 hydroxyproline O-arabinosyltransferase
7480122
Glycosyltransferases [BR:
pop01003
]
O-Glycan biosynthesis
O-linked Ara type
7480122
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPAT
HPAT_C
Motif
Other DBs
NCBI-GeneID:
7480122
NCBI-ProteinID:
XP_024442039
LinkDB
All DBs
Position
1:complement(28911181..28915712)
Genome browser
AA seq
366 aa
AA seq
DB search
MIGRKNMGRASPLLLVLLALGFFFAMYNLLTLVIQYKDSSSGAGSGNPDPVIRMPTNLRK
LGKSNLKFHVALTATDAPYSQWQCRIMYYWYKKMKNMPGSDMGKFTRVLHSGKGDHLMDE
IPTFVVDPLPEGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFANPLPNLAHGD
NPAGFPFFYIKPTEHEKIVQKFYPEEKGPVTDVDPIGNSPVIIKKSLLEEISPTWVNVSL
RMKDDPETDKAFGWVLEMYAYAVASALHGVRHILHEDFMLQPPWDLEVGKRFIIHYTYGC
DYNMKGELTYGKIGEWRFDKRSYLSGPPPKNISLPPPGVPESVVRLVTMVNEATANIPGW
DSLNSG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgattgggagaaaaaatatggggcgagcgtcgccattgcttttggtgcttttggcacta
ggatttttctttgcgatgtataacttgttgactttggtaatacaatataaggattctagt
tcaggagctggatcagggaatcctgatcctgtaatacggatgccaaccaatttgaggaaa
ttagggaagtcgaatttgaaattccatgttgcccttacggctactgatgctccttatagt
caatggcaatgccggattatgtattattggtataagaagatgaaaaacatgccaggatca
gacatgggaaagtttactcgagtgttgcattcgggaaaaggtgatcatttgatggacgag
attccaacttttgttgttgatcctcttccggagggcttagatcggggctatattgtctta
aatagaccgtgggcttttgtgcaatggctggaaaaagcaactattgaggaagaatacatt
ctaatggcagaacctgaccacatatttgcaaatcctttgcctaacttggcacatggagat
aatccagcagggtttccatttttctatattaaaccaactgaacacgagaaaattgttcaa
aagttttatcccgaggagaagggtcctgtgaccgacgttgatccaattggcaattctccc
gtaataataaaaaagtcactgctggaggaaatttcaccaacatgggtgaatgtttcgcta
agaatgaaagatgacccagagactgataaggcatttggttgggtgcttgaaatgtatgcc
tatgctgtagcatcagcattgcatggtgtgcggcatatactccatgaagactttatgcta
cagccaccatgggatttggaagttgggaagagatttattatccactacacttatggatgc
gactacaatatgaagggagaattaacatatggaaagattggagaatggcggtttgacaag
agatcctatctcagtggtcctccaccaaagaacatttccctgcccccaccaggagttcct
gaaagtgtggtgagacttgtaacgatggttaatgaggctacagctaacatccctggctgg
gactcattaaacagtggctga
DBGET
integrated database retrieval system
