Populus trichocarpa (black cottonwood): 7480129
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Entry
7480129 CDS
T01077
Name
(RefSeq) alkylbase DNA glycosidase-like protein mag2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
7480129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pop03400
]
7480129
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
7480129
DNA repair and recombination proteins [BR:
pop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
7480129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
SAM_Ribosomal_mS41
Motif
Other DBs
NCBI-GeneID:
7480129
NCBI-ProteinID:
XP_002310239
UniProt:
B9HF10
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Position
7:complement(1866400..1867565)
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AA seq
276 aa
AA seq
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MGKPVTRSHSLPLHEPSSPPLSTTTSSKISFQSRKIRKLSTNKTTTTTTAITSTSIPPLK
PLSHKGEIELALDHLSKSDPLLAPLLNSHEPPALNPCTSPFLSLTKSILFQQLATNAAKS
IYTRFLTLCDGESQVNPDTVLSLSAPKLREIGVSGRKASYLHDLAEKYRNGSLSDSSILE
MNDDMLLNRLTEVKGIGVWSVHMFMLFSLHRPDVLPVGDLGVRKGVQSLYGLKDLPQALE
MEQICEKWKPYRSVGSWYMWRLMEAKALANKAAKKA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacccgttacccgatcccactctctacctctccacgaaccctcttctcctcca
ctatccactaccacctcctccaaaatctcatttcaatctagaaaaatcagaaaactttca
accaacaaaacaaccaccactaccaccgctataacctccacttccatcccccctctcaaa
cccttatctcacaaaggcgaaatagaactggcacttgatcatttaagcaaatcagatcct
cttcttgcacctctattaaacagccatgaaccaccagcactgaatccttgtacctcaccg
tttctttctttaacaaaatccatcctttttcaacaactagcaacaaacgcagccaaatca
atctacacacgttttctcactctctgtgacggagaatctcaagtaaacccagatactgta
ctctcattatctgcccccaaactcagagaaatcggggtttctggtcgaaaagcgagttat
ttacatgacttagcagagaaatatcgaaatgggtctttatctgactcctcaattcttgaa
atgaatgatgatatgttattgaataggttgactgaagttaagggaattggggtttggtct
gtgcatatgtttatgctattttcgttgcacagaccggatgttttgcctgttggtgatctg
ggtgtgagaaaaggggtgcaaagtttgtatgggttgaaggatttgccacaggcattggag
atggagcagatttgtgagaaatggaagccttataggtcagttgggtcgtggtatatgtgg
aggttaatggaagctaaggctttggcgaataaagcagctaaaaaagcataa
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