Populus trichocarpa (black cottonwood): 7480178
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Entry
7480178 CDS
T01077
Name
(RefSeq) transcription initiation factor TFIID subunit 14b
KO
K11341
YEATS domain-containing protein 4
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
7480178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7480178
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
7480178
NuA4 complex
7480178
Chromatin remodeling factors
SRCAP complex
7480178
SWR1 complex
7480178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YEATS
pYEATS
Motif
Other DBs
NCBI-GeneID:
7480178
NCBI-ProteinID:
XP_052310283
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All DBs
Position
7:984940..987322
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AA seq
280 aa
AA seq
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MPHTTTPLPSKTGIQLEDVESAAKPQRIKPTDYTDNNINQDENKRLKDVEISVPVVYGTM
AFYLGKKANELQSHKWTVYVRGATNEDLGVVIKQVVFQLHPSFDNPIRVVESPPFELSEC
GWGEFEICISILFHDDVCDKHVDLFHLLKLYPDAESGPQSTKKPVVVETYNEIVFPDPSE
NFLARVLNHPAVYVPRLPAGFNFPAPVPSPNMNVKGKDDTKNHPLNHWFINFSEADELLK
LASARQQVQDHILKLRRQLSMLDGPPQPSKLAYGMISECT
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccacacgacaactccattaccctcgaaaacaggcattcaactagaagatgttgag
tctgctgcaaaacctcaacgcatcaaacccactgattacaccgacaacaacataaaccag
gatgaaaacaagaggcttaaagatgttgaaatcagtgttccggtggtatatggaactatg
gcattttaccttggtaaaaaggccaatgagttacagtctcataaatggacagtgtatgta
cgcggagcgacgaatgaggatcttggtgtagtgataaagcaagtcgtgtttcaattgcat
cctagttttgataaccctataagagttgttgaatctccaccatttgagttatctgaatgt
ggttggggtgaatttgaaatttgtatctccatactttttcatgacgatgtctgtgataag
catgtggacttgttccacttattgaagttgtatcctgatgctgaaagtggtccacagtca
accaagaaacctgttgttgtggaaacttataatgagattgtctttcctgacccctcagag
aactttttggctcgcgtgctgaatcatcctgctgtatatgtgccacgacttcctgctgga
tttaacttccctgctcctgttccaagcccaaatatgaatgtgaaagggaaagatgatacc
aaaaaccatccattgaatcactggttcataaatttttcagaggcagatgagcttttgaaa
cttgcatctgctcgtcagcaggtgcaagatcatattcttaagctgagaagacaattgagc
atgttagatggaccacctcaaccatcaaaactagcctacggtatgatatctgaatgtaca
tga
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