Populus trichocarpa (black cottonwood): 7480437
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Entry
7480437 CDS
T01077
Name
(RefSeq) ubiquitin-NEDD8-like protein RUB1
KO
K12158
ubiquitin-like protein Nedd8
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7480437
Ubiquitin system [BR:
pop04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
7480437
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
DUF2604
Rad60-SLD_2
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Plexin_RBD
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
7480437
NCBI-ProteinID:
XP_002307191
UniProt:
A9P8E2
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All DBs
Position
5:complement(6882641..6884387)
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AA seq
157 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI
YAGKQLGDDKTARDYNIEGGSVLHLVLALRGGFCLYH
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgttaagaccttgactggaaaaaccatcactcttgaggttgagagcagt
gacaccattgacaacgtcaaatccaagattcaggacaaggaaggcatccctccagatcag
cagaggttgatttttgctggtaagcaattggaagatggccggacacttgctgattataac
attcagaaggagtcaacacttcacttggttttaaggctcagaggaggaactatgattaaa
gtcaagactctcactggaaaagaaattgagattgacattgaacctactgatactattgat
cgtgttaaggaacgcgttgaggagaaggaaggaattccacctgtgcaacaaaggcttatt
tatgctgggaagcagcttggtgatgacaagactgctcgagactacaatattgagggtggc
tctgtgcttcatcttgtgcttgctctcaggggcggtttttgcttatatcattag
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integrated database retrieval system
