Populus trichocarpa (black cottonwood): 7480469
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Entry
7480469 CDS
T01077
Name
(RefSeq) glutamate receptor 3.6
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
7480469
Ion channels [BR:
pop04040
]
Ligand-gated channels
Glutamate (ionotropic)
7480469
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
7480469
NCBI-ProteinID:
XP_002306435
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Position
5:7438543..7442092
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AA seq
929 aa
AA seq
DB search
MGLCTIMHKVLFVAVMVFSNGLSSNGIGLNDTARPKVVKIGALLNFNTTVGKVAKVAIEA
AVEDVNNSTILGETKLQVTMQDTENSSFLGMLDALSLMDGETVAIIGPETSATAHVVSQI
ADEIHIPMLSFGATDPTLSSLQYPFFVRTTQNDLFQMAAIAEIIDYYGWRDVTAIYVDDD
HGRNGIAALGDKLAERRCRISHKAPISPSLSRENIRNELKTANSEESRIFVLLAHADWGL
EVFRVAQDIGMTGSGYVWLVTDWLASTFDTNSSISPEAIGGVQGAITLRMHTPDSQQKTK
FVSGWSKLITRDKMVNGTGLNTYGLYAYDTVWLLAYGIDAFFKQGGNISFSQDPKVTEQH
RGKLKVDEVRIFNGGDLLLHIILQVNTTGVAGPIKFDSDRNLIHPAYEVMNVNGKGFKRI
GYWSNYSGLSVVPPETLYTKPPNRSSLSQELESVIWPGQTKQKPRGWVFPENGRQLRIAV
PNHVIYHELVSVKGADSFSGYCIDVFTAALSSLPYAVPYKLHAFGNGINKPKISELLQLI
EADVYDAAVGDLAITNNRTRIVDFTQPYVESGLVVVAPVQKLNSNSLAFLRPFTPMMWLV
TGIFFLVVGVVVWILEHRVNDDFRGPPKRQIATIIWFSFSTLFFSHKQNTVSSLGRFVLL
IWLFVVLILNSSYTASLTSILTVEQLSSPIKGIESLVTSNDRIGFQRGSFAENYLAEEYN
IARSRLVALNSDEDYAKALKDGPQKGGVAAVIDERAYIELFLSTRCDFSIVGQEFSKSGW
GFAFPRDSPLAVDMSAAILKLSEGGELQRIHDKWLQRSPCSSEGAKESINRLHLKSFWGL
FLMCGVACLLALLLYLIKILWKFSNYSEDTEPSSRGTSSPGLQTFFSFVSEKEADITSRS
KKRRMERTSKKVRGGDESPNCSFGNSNEV
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggggttgtgcaccatcatgcataaggttttgtttgtggctgtaatggttttcagcaat
gggttatcatcaaatgggatcggtctgaatgatactgcaagaccgaaggttgtcaaaatt
ggggctcttctaaattttaatactaccgttggaaaagttgcgaaggttgcaatagaagct
gctgttgaagatgtgaataacagtactatccttggtgagacaaagctgcaagtcactatg
caggacacagagaatagcagctttcttggcatgcttgacgctttaagcttgatggatggt
gagacagtggccataattgggcccgagacttcagctactgctcatgttgtatcgcaaatc
gccgatgagattcatatccccatgttgtcatttggagctacagacccgacactatcttca
cttcagtacccattctttgtcaggacaacacagaatgatctatttcagatggcagcaata
gcagaaattatagactactatggatggagagatgtaacagcaatctatgtagatgacgat
catgggagaaacggaattgcagctttgggagacaagttggccgagagacgctgtaggata
tcacataaagctcctataagccccagtctgagccgtgaaaacatccgcaatgaactgaaa
acggcgaattcggaggaatctaggatttttgttcttcttgctcatgcagactggggtctg
gaggtttttagggtggcgcaagatattgggatgacaggaagtggctatgtctggctagtt
accgattggcttgctagcaccttcgatactaattcttctatctctccagaagcaattggt
ggagtgcaaggagctattacgttgcgtatgcacacaccagattcacaacagaaaacgaaa
tttgtctctggatggagcaaattgatcactcgggataaaatggttaatggcactgggtta
aatacttatggtctatatgcttatgacactgtctggttgctggcttatggaattgatgcc
tttttcaagcagggaggaaatatttcattttcacaagatccaaaggtaaccgagcagcat
agagggaaactgaaggtggatgaagtgagaatcttcaatggaggggatcttttgcttcac
atcattttacaggtcaatacgaccggagtagcagggccaatcaagttcgattcagatagg
aacctcattcatccggcatatgaagttatgaacgtcaatggcaaagggtttaaaaggatc
ggttattggtctaattactctggcttatcagttgtgccaccggaaacgctttatacaaag
ccacctaatcgttcaagtttgagtcaagaactagagagtgtaatctggcctggacaaacg
aaacagaagcctcgtggatgggtttttccagagaatggaaggcaattgagaattgcagtg
ccaaaccatgtcatttatcacgagttggtctctgtgaaaggcgctgattcattcagtgga
tactgcattgatgtatttacagctgctttgagctctttgccttacgctgtcccatataag
ctacatgcatttgggaatggtattaacaaacctaaaatatctgagcttctgcaattgatc
gaagccgatgtctatgatgctgcagtaggggacttggctatcaccaacaatcgaacgagg
attgtggatttcacacagccctacgtggagtccggcctagtcgtagtggccccagttcag
aagttgaactctaattctttggcattcttgaggccattcactccgatgatgtggttagta
acgggaatctttttccttgttgtcggagttgttgtttggatcttggagcatagagtcaac
gatgattttcgaggccctcctaagagacaaattgcaactattatatggttcagcttttca
acattgtttttctcccataagcaaaataccgtcagctcccttggtcgctttgtgctactc
atctggctattcgtagttcttatactcaattcaagttacactgcaagtttgacctcaatt
cttacggtagaacaactttcttcgcccattaaagggattgagagtttggtaacaagcaat
gaccgcataggcttccagcggggatcattcgctgaaaattatctagcggaggaatacaac
atagccaggtctagacttgttgctctcaactccgacgaggactatgccaaagccttgaaa
gatggtccccagaaaggaggtgttgctgcggtgattgatgaacgagcatacatagagctt
ttcctctccactcgatgtgacttcagtattgtaggtcaggagttcagcaaaagtgggtgg
ggatttgcatttccgagggactcacccttagcagtggacatgtcagcggccatcctgaaa
ctttcagaaggcggagaactccaaagaatacatgataaatggctgcagagaagtccctgt
agttcagaaggtgcgaaagaaagtataaaccgacttcacctaaaaagcttttggggcctt
tttctcatgtgtggtgtagcttgtttgctcgctctccttctatatcttataaagatactg
tggaagttttccaattactcagaagacaccgagccttcaagtcgaggcacttcatctcca
ggtcttcagacattcttttcatttgtcagtgaaaaggaagcggacatcactagtcggtcc
aagaaaaggcgaatggagaggacctcaaagaaagttagaggtggagatgaatcaccaaac
tgttcttttgggaatagtaatgaagtctag
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