Populus trichocarpa (black cottonwood): 7480674
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Entry
7480674 CDS
T01077
Name
(RefSeq) heat stress transcription factor A-6b
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7480674
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7480674
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
JIP_LZII
Motif
Other DBs
NCBI-GeneID:
7480674
NCBI-ProteinID:
XP_024450269
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All DBs
Position
2:complement(3204270..3207394)
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AA seq
359 aa
AA seq
DB search
MNPYLTVKQEYAGSSLLPLSGGDEPPTMMLPPQPMEGLHDTGPPPFLTKTFDMVDDPMTN
HIVSWSRGGFSFVVWDPYSFSANLLPRYFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEG
FLRGQKQLLRNIKRRKAASQPLSQQQAPDACVEVSRFGLDGEIDLLKRDRHVLMMELAKL
RQQQQKARSYIQAMEQRLQGTEQKQQQMMQFLARAMQNPAFLLQLVQQKGKRKELEEAMT
KKRRIPVDQRPSRSGGGESNRIDESANPIKAEALEYGDYGFEVSELEALALEMQGYGRAR
REQEDGVEELEPLESGDRELDEGFWEELLNESAGGGEDEDVNTLAERLGYLRSSPKYRN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatatctaacagtgaagcaagagtacgcaggatcaagtttattgcctctgtcc
ggcggtgatgagccgccaacaatgatgctcccaccacagccgatggaaggtttacatgat
acaggaccaccgccattcctgaccaagacttttgacatggtggatgacccaatgactaat
cacatagtttcttggagcagaggagggtttagctttgttgtttgggatccttattctttc
tccgcaaatctccttcctagatacttcaagcataataatttctccagctttgtcaggcag
ctcaatacttatggctttagaaagattgatccagatagatgggagtttgccaatgaagga
tttctgaggggtcaaaagcagcttctaaggaatataaagagaagaaaggcagcttctcag
cctctttctcaacagcaagctccagatgcctgtgttgaagttagccgttttggattagat
ggagaaatcgatctcttgaaacgtgacaggcacgttttgatgatggaattagcgaagctt
agacagcagcaacagaaagctagatcttatatacaagctatggagcaaaggctacaaggg
acagaacaaaagcagcagcagatgatgcaattcttagctcgagcaatgcaaaatcctgcc
tttctactgcagttagtccaacagaaagggaaaaggaaagaacttgaggaagcaatgact
aaaaagagaagaattcctgttgatcaaagacctagtcgaagtggtggtggtgaatcaaac
cgtattgatgaaagtgcaaaccccatcaaggcagaggctttagaatatggagactacgga
tttgaagtgtcagagctggaggcacttgcattggaaatgcaagggtatggcagggcaagg
agagagcaagaggatggagtagaagagctagagccactagaaagcggagatagagaactt
gacgagggattttgggaagaactgttaaatgagagtgctggaggaggtgaagatgaggat
gtgaatacattagctgagcgcttgggttatttgcgttcaagtcctaagtacagaaattga
DBGET
integrated database retrieval system
