Populus trichocarpa (black cottonwood): 7480704
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Entry
7480704 CDS
T01077
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7480704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7480704
03032 DNA replication proteins [BR:
pop03032
]
7480704
Spliceosome [BR:
pop03041
]
Complex A
U1 snRNP components
Sm proteins
7480704
U2 snRNP components
7480704
Complex B
U1 snRNP components
7480704
U4/U6.U5 tri-snRNP components
7480704
Complex C
U2 snRNP components
7480704
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
7480704
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
WHD_ArnR1
Gemin7
YomU_Tube
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
7480704
NCBI-ProteinID:
XP_002302121
UniProt:
A9PA33
A0A2K2BDX9
LinkDB
All DBs
Position
2:complement(3716873..3719577)
Genome browser
AA seq
115 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTVKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRALGGRGRGRGRGRGRGRGR
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttttgatgaagctgaacaatgagaccgtctcaattgaactcaag
aacggaactgttgttcatggaaccatcacaggtgttgatatcagtatgaatactcatctg
aaaacagtgaaactaacagtgaaagggaaaaacccagtaactttggatcatctcagcgtg
aggggcaacaacattcgttattacatccttcctgacagcttgaatcttgagactttgctg
gttgaggagacacctagggtcaaacctaagaagccaacagctgggagggctttgggtggt
cgaggcaggggccgtggacgtggtcgtgggcgcggacgtggccgctaa
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