Populus trichocarpa (black cottonwood): 7480715
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Entry
7480715 CDS
T01077
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00906
Carotenoid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
7480715
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pop01006
]
7480715
Enzymes [BR:
pop01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
7480715
Prenyltransferases [BR:
pop01006
]
Terpene biosynthesis
Squalene/phytoene synthase
7480715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
7480715
NCBI-ProteinID:
XP_002302132
UniProt:
B9GT08
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Position
2:complement(3870529..3873793)
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AA seq
406 aa
AA seq
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MSGALLWVICPKENAGFAATTSYSLVPKIRAQVRSHNSKGCSRLNFSSGVFAAASLSSAV
ANPPRSSVEKVYEVVLKQAALVKEQKKERALDVRKEKGQTDSMTRGDLLNGAYNRCGEVC
AEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALDRWEQRLNELF
EGRPYDMYDAALSNTVSKYPVDIQPFKDMIEGMRMDLKKSRYKDFDELYLYCYYVAGTVG
LMSVPVMGIAPESKASTESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAG
LSDEDIFNGKVTDKWRSFMKVQIKRARMFFDEAEKGVAELNDASRWPVWASLLLYKQILD
SIEANDYDNFSKRAYVGKTKKFASLPVAYGRALMGGSSKFAKPASS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgctctcctttgggtgatttgtcccaaagagaatgccggttttgctgcaaca
acttcgtacagtttagtcccaaaaattcgcgcacaagtaagaagtcataactccaaaggg
tgttcaagactcaatttctcttctggggtttttgctgccgcttccctttcaagtgcagtg
gcaaacccaccaagatcttcagttgagaaggtgtacgaggttgttctaaagcaagctgct
ttggtgaaagaacagaaaaaagagagagctttggatgttagaaaagaaaagggtcaaact
gatagtatgactcgtggggatctgctgaatggggcgtacaataggtgtggcgaggtctgt
gctgagtatgccaagaccttttacctgggcacattactgatgacaccagagcgacgaaga
gctgtctgggcaatttatgtgtggtgcaggagaactgatgagcttgtggatggccctaat
gcatcacatatcacacccaaagctctcgacagatgggagcaaaggctgaatgaacttttc
gaaggtcgcccatatgatatgtacgatgctgctctatcaaacactgtctccaagtaccct
gttgatatacagcccttcaaggacatgatagaaggaatgagaatggacttgaaaaagtcg
agatacaaggactttgatgagctttacctgtactgctattatgttgccgggacagtgggg
ctaatgagtgttccagtaatgggaatagcaccggaatccaaggcctcaacagaaagcgtc
tacaatgcggctttagcccttgggatagctaatcaactaaccaatatactcagagatgtt
ggagaagatgctaggaggggaagaatatatctcccacaagatgagctcgctcaagctggc
ttgtctgatgaagacatttttaatgggaaagtgacagacaaatggaggagtttcatgaag
gtacagataaagcgtgcaagaatgttcttcgacgaggctgagaagggtgttgcagaactc
aatgatgctagtagatggccggtatgggcatctttgctgctatataagcagatattagat
tctatcgaagcaaatgactatgataacttctcaaagagagcttatgtgggaaaaacaaag
aaatttgcatcattgcctgtagcctatggtagagcactcatgggtggttcttctaaattc
gccaagccagcaagtagttga
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