Populus trichocarpa (black cottonwood): 7480751
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Entry
7480751 CDS
T01077
Name
(RefSeq) phospholipase D delta isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00564
Glycerophospholipid metabolism
pop00565
Ether lipid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
7480751
00565 Ether lipid metabolism
7480751
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7480751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7480751
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
7480751
Membrane trafficking [BR:
pop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
7480751
Endosome - Golgi transport
Others
Others
7480751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLD_C
C2
PLDc
PLDc_2
Motif
Other DBs
NCBI-GeneID:
7480751
NCBI-ProteinID:
XP_024452956
LinkDB
All DBs
Position
3:complement(1665105..1676971)
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AA seq
853 aa
AA seq
DB search
MSTETNVPRTAQSTAIQSSKESVFLHGELDIWILEAKSLPNMDLASENMRKCFTMCGSYS
PLCGHKPMTHSGKHSIITSDPYVSVCLAGATVAQTRVIANCENPLWDEHFCVPVAHPVVK
VEFHVKDNDFLGAQLIGVVEIPAEKIISGNTINDWFPIICTSGTCLKPYPELHFSIQFKP
VEDNPLYKDGVGDGPEYKGVPNTYFPLRKGGSVTLYQDAHVPDAVLPKITLDDGKVFQHS
SCWEDICHAILEAHNLIYIVGWSVYHRVKLVREPTKPLPAGGELTLGELLKYKSEEGVRV
VMLLWDDKTSHDTFCLKTDGVMQTHDEETKKFFKHSSVHCVLAPRYGSNKLSVFKQQVVG
TLFSHHQKCVILDTQSSGNNRKITSFIGGLDLCDGRYDTPEHRLFRDLHTVFENDFHNPS
FPSNTKSPRQPWHDLHCKIEGPAAYDILTNFEQRWKKATKWRRIKKVTRWHDDALIKLER
ISWILTPSSSPNGDKIVHVTDEGDPENWHVQVFRSIDSGSVKGFPKSTQEAVDQNLVCGK
NLKVDKSIHTAYVKAIRSAQHFIYIENQYFLGSSYYWPSYKNAGADNLVPMELALKIASK
IRANERFSVYIVIPMWPEGVPTSASVQEILYWQGQTMAMMYKIIAKELEKAGLSYQYHPQ
YYLNFYCLGKRENSPHDSSEINQQTENRSLAAAQKFRRFMIYVHAKGMVVDDEYVIMGSA
NINQRSLDGSRDTEIAMGAYQPTYTWARKNSHPHGQVYGYRMSLWAEHLGILEKAFDEPQ
SLECMKLVNKTSRHNWKAYVSEESKEMRGHLMQYPIQVSKSGEVSALQGHETFPDVGGKV
LGASTNLPDVLTT
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagaaaccaatgttcctcggacggctcaatcgactgcaattcagtcttctaaa
gaatctgtttttttacatggtgaattggacatatggatcttagaggctaaatctcttcca
aatatggatctagcttcagaaaatatgagaaaatgttttactatgtgtggatcttactca
ccactttgtggacacaaacccatgacacattcaggcaaacattcaatcattactagtgat
ccctacgtgtctgtttgccttgcaggggcaacagtagcccagactagagtgattgccaat
tgcgagaaccctttgtgggatgagcatttctgtgtcccagttgcccaccctgttgtaaaa
gtagagtttcatgtcaaggacaacgattttcttggggcacaacttattggagtagtggaa
ataccagctgagaaaatcatctctggaaatactattaatgattggtttcctatcatttgc
acttctggaacttgcctgaaaccttaccctgagttacatttttccattcaattcaagcca
gttgaagacaatcctttatacaaagatggtgttggtgatggaccagaatacaaaggagtt
cccaatacatactttccactccggaaaggagggtcagtgacactttaccaagatgctcat
gtacctgatgctgtgctacctaaaattacactggatgatgggaaagtttttcagcatagt
agttgttgggaagacatatgccatgctatcttagaagctcacaacctgatatatattgtg
gggtggtcagtgtaccaccgtgtcaagctggtgagggagccaacaaagccattgccagcg
ggaggtgagcttactctgggagagttgttaaagtacaagtcagaagaaggggtccgtgtg
gttatgctattatgggacgataaaacttcacatgacacattctgtctgaaaacggatggt
gtcatgcaaactcatgatgaagaaaccaagaaatttttcaaacattctagtgtccattgc
gtgcttgcacctcgttatggaagcaataagcttagcgttttcaagcaacaggttgtggga
acgctttttagccaccatcagaagtgcgtgattcttgatactcaatcttctgggaacaac
cgaaaaattacttctttcattggtggcttggatttatgtgatggcagatatgacactcct
gaacataggctctttcgtgatcttcacacagtttttgaaaatgattttcacaatccttca
tttccttctaataccaaaagcccaaggcaaccatggcatgacttgcattgtaaaattgag
ggtccagctgcttatgatatattgacaaattttgagcaaaggtggaaaaaagccacaaaa
tggcgtaggatcaaaaaggtcactcgttggcatgatgatgccttgataaagctagaacgg
atttcatggatactcactccatcttctagtcctaatggtgataaaattgtgcatgttact
gatgaaggagatcctgagaattggcatgtgcaggtattccgatctatagattcaggatct
gtgaagggatttccaaagtctactcaagaagctgtggatcagaatcttgtgtgtggaaag
aatttgaaagtagataagagcattcatacagcatatgtaaaagcaataagatcagcacaa
cacttcatatacatagagaatcaatattttcttggatcttcctattattggccatcatac
aaaaatgcaggagctgataacttagtccccatggaactagcactgaaaattgctagcaaa
atcagagcaaatgagcggttttcagtgtatatagtaataccaatgtggccagagggtgtt
ccaaccagtgcttctgtgcaggaaattttgtattggcagggacaaacaatggccatgatg
tacaagattattgcaaaagaacttgaaaaggcagggctttcctatcagtaccatcctcaa
tattatttgaacttttattgccttggtaaacgtgaaaattctccacacgattcttcagag
ataaaccagcaaactgaaaatcgttcactggcagcagctcaaaagtttcggagatttatg
atatatgtacatgcaaaaggaatggtagttgatgatgaatacgtaatcatgggatcagca
aacattaaccagagatccttggatggttcaagggacacagaaatcgctatgggggcttac
caaccgacatacacatgggccagaaaaaactctcatccacatggacaggtatatggctac
cggatgtctctctgggcagagcacttaggcatcctcgagaaagctttcgacgagccacag
agccttgaatgcatgaaacttgtcaacaagacttccaggcacaactggaaagcatatgtc
tccgaggagagtaaggaaatgaggggacacttgatgcaatatccaattcaagtgagcaaa
agtggagaagtgagtgccttacaaggtcatgaaacatttcctgatgttgggggcaaagtt
cttggagcatccaccaacctccctgatgttcttaccacatag
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