Populus trichocarpa (black cottonwood): 7480903
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Entry
7480903 CDS
T01077
Name
(RefSeq) myosin-6 isoform X1
KO
K10357
myosin V
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
7480903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7480903
04131 Membrane trafficking [BR:
pop04131
]
7480903
03029 Mitochondrial biogenesis [BR:
pop03029
]
7480903
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7480903
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
7480903
mRNA cycle factors
P-body specific factors
7480903
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Myosins
7480903
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
7480903
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
7480903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Hpr_kinase_C
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
7480903
NCBI-ProteinID:
XP_024463102
LinkDB
All DBs
Position
8:12053822..12072447
Genome browser
AA seq
1494 aa
AA seq
DB search
MAAQVNSMVGSFVWVEDPEEAWMDGEVLEVNGEEITVNCASRKAVVAKASNVFPKDPEFP
PCGVDDMTKLAYLHEPGVLQNLRCRYDINEIYTYTGNILIAVNPFRRLPHLYDNHMMEQY
KGATIGELSPHPFAVADSAYRQMINEGISQSILVSGESGAGKTESTKMLMRYLAYMGGRA
AAEGRSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVEIQFDQSGRISGAAIRTYLLE
RSRVCQVSDAERNYHCFYMLCAAPEEVIEKYKLGNPRTFHYLNQSNFYDLDGVNESEEYL
ATRRAMDIVGINANEQDAIFRVVAAILHLGNVEFAKGNEIDSSEPKDDKSQFHLKTAAEL
LMCNEKSLENSLCKRVIVTRDESITKWLDPDAATVNRDTLAKIVYSRLFDWIVSTINNSI
GQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKAEQEEYTKEEID
WSYIEFIDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAEKLYQTFKDHKRFNKPKL
ARSDFTICHYAGDVTYQTEHFLDKNKDYVVAEHQSLLSESMCSFVSGLFPPLPEESAKSS
KFSSIGSRCKQQLQALLETLSATEPHYIRCVKPNNALKPSIFENNNVLQQLCCGGVMEAI
RISCAGYPTRKTFDEFVRRFAILAPDVLHGGCDEVSACKMLLEKVNLKGYQIGKTKVFLR
AGQMAELDAHRSELLGRSASIIQRKVRSYFCRKSFILLRQSAIHIQTLCRAEVARNRFEC
LRREAACLKIQKYSRRYLASKAYNNLCFSAVSIQSCMRGMAARNELCFRKQMRAVIVIQS
QCRKHSAQLHYLRLKRAAIATQCAWRGRVARKELRKLKMAAKETGALQAAKSKLEKEVEE
LTWRLQLEKRMRADLEESKTQENAKLRTTLQEMQLEFQESKALLIKERESIKKEAEKVPT
IQEVPVIDNELVNKLTAENEMLKAMVSSLEKRIDETEKKYEETSKLSEEHLKQALDAESK
IIELKTAMQRLEEKLSDMEAEDQVLQHQALFSSSSRKMSEHLEITSQHLENGHHEPPTPS
KRLGTDADKKMRKSQIERLHESVDALIKCVEQNPGFSQGKPVGAFTIYRCLVQWRSFEAE
KTSVFDRLIQMIGSAIENQDDNNHMAYWLSNTSMLLFLLQRTLKDSGANSNPPPPTSFFG
RMAQGFRSSPSSANLRVGRDIQMVEAKYPALLFKQQLTAYVETIYGIVRDNFKKDLSPLL
SSCIQAPRASRGTALKSSLSFGHNTPADSWRSIVNSLDGLLCTLKENFVPPIFVQKIFTQ
IFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCGQAKEEYVGASWDELKNTRQA
VGFLVIHQKSRISYDEITNDLCPVLSVQQLYRVCTLYWDDDYNTRSVSPDVISSMKTLAN
DSNDDDSNSFLIDDNSSIPFSVDDLSGSFHEKDFSDVKPAADLLENPAFQFLQD
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaagtcaattcaatggttggatcttttgtttgggtggaggatcctgaggaa
gcttggatggatggggaagttttggaagttaatggtgaagaaattacagtaaactgtgca
tcaaggaaggcggttgttgctaaagcatctaatgtttttccaaaggatcctgaatttcct
ccatgtggcgtggatgatatgaccaagctggcatatttgcatgaaccaggggttttgcag
aatcttagatgtagatatgatataaatgaaatatatacttacacaggaaatatattgatt
gctgtgaaccctttccgaagacttcctcatttatatgataatcatatgatggaacagtat
aaaggggcaaccattggtgagttgagcccacatccttttgccgtggcagattcagcatac
agacagatgattaatgaaggaataagccagtcaattttggttagtggggaaagtggagct
ggtaaaacagagagtacaaaaatgctcatgcgttatttggcctacatgggagggagggct
gcagctgagggacggtctgtggagcagcaagttttagagtccaatcctgttctggaagca
tttggtaatgcaaagacactgagaaataataattcaagccgttttggtaagtttgtggag
attcagtttgatcaaagtgggaggatttcaggagctgctattagaacttatttactggaa
cgctcccgtgtttgccaagtgtctgatgctgagagaaactatcattgtttttacatgctc
tgtgctgcgccagaagaggttatagagaagtacaaattgggaaatcctagaacatttcat
tatcttaatcaatcaaatttctatgatctggatggagtgaatgagtccgaggagtatctg
gcgaccagaagagctatggatattgttgggataaatgctaatgaacaggatgcaatattc
cgagttgtggctgcaatactacatctaggcaatgtggagtttgctaagggaaatgaaata
gattcttctgaacctaaggatgataagtctcagtttcatctcaagacagcagctgaactt
ttgatgtgcaatgagaagtctcttgaaaactcattatgcaagcgtgtgatagtaactcgt
gatgagagcataacaaaatggcttgatccagatgctgcaactgtcaatagagatactttg
gccaaaattgtttattcgagattatttgactggattgtaagcacgataaacaactctatt
ggtcaagatcctaattccaaatctttaattggagttctggatatatatggatttgagagt
ttcaagacaaacagttttgagcaattttgtataaacttgaccaatgaaaagctgcagcaa
cacttcaaccagcatgtcttcaaggcggagcaagaagaatatacaaaggaagaaattgat
tggagttacatagaattcattgataaccaggatattcttgatctgattgagaagaaacct
ggtggcatcattgctctgcttgacgaagcttgtatgtttcctagatcaacacatgaaaca
tttgcagaaaagctttatcagactttcaaagaccacaaacgttttaacaaacctaagtta
gctcgcagtgacttcaccatttgtcattatgctggagatgtgacatatcaaactgaacat
tttctggataagaacaaggattatgttgttgcagagcatcaatctcttctcagtgagtcc
atgtgctcctttgtttcaggcctgttcccaccattgcctgaggaatctgccaaatcatca
aagttctcatcaataggttctaggtgtaagcaacaactacaagcattgcttgaaacactg
agtgctactgagccacattacattcgttgtgtaaaaccgaataatgctctaaagccatcc
atctttgagaataataatgttttacaacagctgtgttgtgggggagtgatggaagcaatt
aggattagctgtgctggatatcccaccaggaagacttttgatgaatttgttcgtcgtttt
gccattctggcaccagatgtgctgcatggcggctgcgatgaggttagtgcttgcaagatg
cttctagagaaggtgaacctcaaaggttatcagattggcaaaacaaaagtttttcttaga
gctggtcagatggcggagctagatgctcatcgaagtgagctgttaggaagatcagcaagc
atcatccagaggaaagttcgatcgtatttttgtcgcaaaagctttatcttattgcgacag
tctgccattcatatccaaactttgtgtagagctgaagtagcacgcaataggtttgaatgc
ctgagaagagaagctgcttgtttgaaaatccagaaatattctcgcaggtaccttgcaagt
aaagcatacaacaatttgtgcttctcagctgtctccattcagtcatgcatgcgtggaatg
gctgctcgtaatgagctttgtttcaggaagcagatgagagctgtgattgtcatccagagt
caatgccgaaaacattcggcccaacttcattatttgaggttaaaacgagcagcaattgcc
actcaatgtgcctggagagggcgggttgctcgtaaagaattacggaagcttaaaatggct
gctaaggagactggtgctctccaagctgcaaaaagtaaactggaaaaggaagttgaagaa
ctcacctggcgtctgcagctggagaaacgaatgagggctgacctagaggaatccaaaaca
caggaaaatgctaaattacgcacaacattgcaagaaatgcagcttgaattccaagaatct
aaagctctgttaatcaaggaacgagagtctataaagaaagaagctgaaaaagtcccaacc
atacaggaagtcccagttattgataatgaactggtgaataaacttactgctgaaaatgaa
atgctcaaggctatggtaagctcactggaaaagagaattgatgaaacagagaagaaatat
gaagagacgagtaagcttagtgaagagcatctgaagcaggctttggatgcagagtcaaag
ataattgagctgaaaacagccatgcagaggcttgaagaaaaactctctgacatggaagct
gaggaccaagttctgcagcaccaagcactgttcagttcatcttcaagaaaaatgtcagaa
catttggaaattacctctcagcatctagaaaatggtcatcatgaaccaccaactccatct
aaaaggcttggcacagatgctgacaaaaaaatgaggaaatctcagattgaacggctacat
gagagtgtagatgctctaataaaatgcgtggagcaaaatcctgggtttagtcaaggaaaa
ccagttggagcatttaccatttacagatgccttgtccagtggagatcgtttgaagcagaa
aaaaccagtgtatttgatcgtcttattcagatgattggttctgcaatagagaaccaggat
gacaataatcatatggcttactggttatctaatacctcaatgctgctgttcttacttcaa
cggactttaaaagacagtggtgccaattcaaatccacctcctccaacatcattttttgga
aggatggcccaaggtttccgttcttcaccttcttcagccaatcttagagttggtagagat
atacagatggttgaggctaagtatccagctttgctttttaaacagcagttgacagcatat
gtggagacgatatatggcattgttcgggataattttaaaaaggatttatcacctcttctt
tcatcatgtatccaggcaccaagggcatcaaggggaactgctttaaaatcatctctgtca
tttggccataatacgccagctgatagctggcgcagcattgtcaatagtcttgatgggctg
ctatgcacattgaaagaaaattttgtgcctccaatttttgtgcagaagatatttactcaa
attttctcatacattaatgtgcagctgtttaatagccttctgcttcgtcgagagtgctgc
acgttcagcaatggggaatatgtgaaggctgggttagctgaattagaattatggtgtggc
caagcaaaagaagagtatgttggagcatcctgggatgaacttaaaaacactaggcaagct
gttggattcttggttatacaccagaaatcgagaatttcctatgatgaaattaccaatgac
ctttgcccggtcctgagtgttcaacagctatacagagtatgcactttatactgggatgac
gactacaatactcgaagtgtatctcctgatgtgatttccagcatgaaaacactagcaaac
gactcaaatgatgatgatagcaactcattcttgatagatgacaattcaagcattcctttc
tcagttgatgacttatctggctcctttcacgagaaggatttctcagatgtaaaacctgca
gcggatcttctggagaatccagccttccaatttttacaggattaa
DBGET
integrated database retrieval system
