Populus trichocarpa (black cottonwood): 7481407
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Entry
7481407 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7481407
KO
K26500
BOS complex subunit NOMO
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7481407
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
7481407
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
DUF7152
NOMO_8th
NOMO1-like_1st
SdrD_B
Ig_NOMO
CarbopepD_reg_2
NOMO1-like_9th
NOMO_5th
NOMO_3rd
EMC7_beta-sandw
SpaA
NOMO1-like_2nd
NOMO_6th
fn3_3
Y_Y_Y
MetallophosN
bMG3
DUF1416
CooC_C
fn3
Motif
Other DBs
NCBI-GeneID:
7481407
NCBI-ProteinID:
XP_024450847
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All DBs
Position
2:complement(15693751..15707151)
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AA seq
1201 aa
AA seq
DB search
MKMIGDLFLCLSIALIFSISAVSADLINGCGGFVEASSSLVKSRNPSATKLDYSDITVEL
RTVDGLVKERTQCAPNGYYFIPVYDKGSFVIKINGPEGWSWDPEKFPVVVDDMGCNRNED
INFRFTGFTISGRVVGAVGGQSCSAKNGGPSNVNVELLSPNDDLIYSIVTSPDGSYLFKN
VIPGKYKVRASHPDLKVEVRGSTEVELGFENGIVDDIFFVPGYDLHGFVVAQGNPILGVH
IYLYSDDVEKVDCPQGSGEDVGQRKPLCHAVTNADGMFRFKSLPCGHYELVPSYKGENTV
FDVSPPLMLVSVEHQHVTVPRQFQVTGFSVGGRIVDGNGMGVEGVKIIVDGHERSATDKE
GYYKLDQVTSNRYTIEAKKEHYKFNKLKEYMVLPNMASIPDIAAISYDVCGVVSMIGSGY
TAKVALTHGPENVKPQVKQTDGNGNFCFEVSPGEYRLSALAVTPDSAPGLLFSPSYADVM
VKSPLLDVQFTQVLVNVHGSVTCKEKCGPSVSIALVRLAGKHTEERKSVSLTNDSDEFLF
QNVAPGKYRLEVKHGSSKAVPNEDNWCWEQRFINVDVGAEDVAGIAFVQKGYWINVISTH
DVDASMIKPDGSPIDLKIKKGSQNLCMESPGVHELHFVNSCIFFGSSPIKIDTSNLLPIY
LKGEKYLLKGQISVELGSADGGYELPNNIIVDILNSEGNLFDGTAAILVSHEDDQTGSAL
FEYSVWANLGEKLTFVPRDPRNNGEKKILFYPREQNVLVANDGCQSPIPPSSGRMGLYIE
GSVSPPLSGVHIKIIASEDSKITPLKKDEIAFQTATGVDGSFLGGPLYDDITYRVEASKP
GYHLKRVGPHSFSCQKLGQISVHIYSKDDSNEPIPSVLLSLSGDDGYRNNSISGAGGTFH
FDNLFPGTFYLRPLLKEYAFSPSAQVIELGSGESREVTFHATRVAYSATGTVTLLSGQPK
EGVSVEARSVSKGYYEETVTDSSGSYRLRGLVPEATYVIKVVKKDGLGTNRIERASPESV
TIQVGSGDIRDLDFVVFEQPEVTILSCHVEGQRMKEPQSQLLVEIKSASDSSKTETVFEL
PVSNFFQVKNLPKTKHLLQLRTSLQSRTHKFESEIIEVDLERTAQIHVGPLRYSFEEDHQ
KQELTPAPVFPLIVGVSVIALFISMPRLKDLYQATVGIPTPGFMTIAKREPRKPAVRKKA
Y
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatcggagacttatttctctgcttatcgatcgcactaattttctcaatctca
gctgtttccgctgatttgattaacggttgtggcggattcgtcgaggcgagttcttctctg
gtaaagtcaaggaatccaagcgccacaaaattggattattctgacatcacggtagagctt
cgtactgtagatggattggtaaaggagagaacacagtgtgcacccaatggttactacttc
attccagtctatgacaagggctcatttgttattaaaatcaatggaccggaaggatggtcg
tgggacccggaaaaattcccggttgtcgttgatgatatgggctgcaaccgcaatgaagat
attaattttcgattcacagggttcactatatctggtagagttgtgggagcagttggtgga
cagagctgttctgcaaagaatggtggtccttcgaatgttaatgttgaacttctgtctcct
aacgatgatctcatttattctattgtaacctcaccagacgggagttacttgttcaaaaat
gttattccaggaaaatacaaagttcgtgcttcacatcctgatttgaaagttgaagttaga
ggttccacagaggtggaattggggtttgaaaatggcatagttgatgacattttttttgtc
cctggatatgatcttcacggatttgtggttgctcagggaaatccaattttgggagttcac
atttatctgtattcggatgatgttgaaaaagtagattgtccccaaggctctggtgaggac
gtggggcaaagaaagcctctctgtcatgctgtaaccaatgctgatggaatgttcagattt
aaatcactaccatgcggtcattatgagcttgttccatcctacaagggtgagaatacggta
tttgatgtttcacctcctctcatgttggtttctgttgagcatcagcatgtaacagttccc
cgacagtttcaggtcacaggattttctgtggggggtcgcatagttgatgggaatggcatg
ggagttgagggtgtcaaaatcattgttgatggtcacgaaaggtctgcaactgataaagaa
ggctattacaagcttgaccaggttacatcaaatcgttatacgatagaggccaagaaggag
cattacaagttcaacaagttgaaggagtatatggttttgccaaatatggcttcaattcca
gatattgcagcaatctcctatgatgtctgtggtgtagtaagcatgattggttctggatac
acggcaaaggtagccttgacccatggacctgagaatgtcaaacctcaagtcaaacagaca
gatggaaatggcaatttctgctttgaggtttcacccggtgagtatcgcttatctgctttg
gctgttacacctgacagtgctcctggacttttgttttcaccatcttatgctgatgttatg
gtcaaaagtccattgctggatgtacaatttactcaggttcttgtcaatgttcatggttct
gttacttgcaaggagaagtgtggtccatcagtttctatcgcccttgtgagattggctggt
aaacatacagaagaaagaaagtctgttagtttgacaaatgatagtgatgaatttctcttt
cagaatgtcgcgcctggaaaatacaggcttgaggttaaacatggttcctcaaaagctgtg
cccaatgaagataattggtgctgggaacagagattcatcaatgtggatgttggtgctgag
gatgttgcaggaattgcttttgttcaaaaaggttactggataaatgttatctcaacccat
gatgtggatgcttccatgattaagccagatggttcgcccattgatttgaaaatcaagaaa
ggttcacagaatttatgcatggaatctcctggagtacatgagctgcactttgttaactcc
tgtattttctttgggagctcgccaataaaaattgatacatcaaacctgctgcctatctat
ctgaaaggagagaagtatcttcttaaaggacaaatcagtgtcgagttaggctcagctgat
ggtggatatgaattacctaataatatcattgtagacatccttaatagtgagggcaatctt
tttgatggtaccgctgccatccttgtatcacatgaagatgatcaaactggatctgccttg
tttgagtactctgtgtgggctaatcttggagagaaacttacctttgttcctcgggaccct
aggaacaatggagagaagaagatcttgttttaccccagagaacaaaatgttttggtggca
aatgatggttgccaatctccaatccccccatcatctggccgaatggggctgtacatagaa
ggatcagtttctccccctctttctggtgttcacataaagattattgcttccgaagacagc
aaaattactccactcaagaaagatgaaatagcatttcaaactgctacaggagtggatggt
tcttttcttgggggccctctatacgatgatataacttacagagttgaggcttcaaagcct
ggctatcatcttaaacgtgtagggcctcattccttttcttgccagaagctaggtcaaatt
tctgtacacatatactccaaagatgattctaatgaacccattccttctgtgctattgtca
ttgagcggtgatgatggttataggaacaactcaatatctggggctggtggaactttccac
tttgataacttatttcctggcactttctatttgcgtcctctactgaaggagtatgctttc
tcgccatcagctcaagtaatagaacttggttctggggagtctagagaagtcactttccat
gccacccgtgttgcttacagtgctacaggtactgtcacactattgtctggccagccaaaa
gaaggtgtctcagttgaagctcggtctgtgtcaaaaggttactatgaggagacagtaact
gattcgtctggaagttataggctgagagggcttgtacctgaggcaacctatgtaattaaa
gtagtaaaaaaggatggcttgggtaccaatagaattgagcgtgcatcacctgaatctgtt
actattcaggttggatcaggggatataagggatttggattttgtggtctttgaacagcca
gaagtgaccattttaagttgccacgtggaaggacagagaatgaaagaaccacagtcacag
ctattggttgagatcaagtcggcaagtgattcatccaagactgagactgtctttgagctc
ccagtgtccaacttctttcaagtgaagaatttacccaagactaaacacctcctgcagctt
cgaacaagtctgcagtcaagaacccataaatttgagtcggagattattgaggttgacctt
gagaggacagcccagatccatgtgggcccactgcgatatagttttgaggaggatcaccag
aaacaggaattaactccagcaccagtgttccctctcatagttggtgtttctgtaattgcc
cttttcattagcatgccaagattgaaggatctgtatcaagccactgtgggaataccgaca
ccaggatttatgacaattgctaagagggaaccccgaaagccagctgtgagaaaaaaggca
tactga
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