Populus trichocarpa (black cottonwood): 7481415
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Entry
7481415 CDS
T01077
Name
(RefSeq) flowering time control protein FCA isoform X2
KO
K13207
CUG-BP- and ETR3-like factor
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7481415
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
7481415
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
WW
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
7481415
NCBI-ProteinID:
XP_002302783
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All DBs
Position
2:15564377..15573276
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AA seq
502 aa
AA seq
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MERHRGDHQRHHELQHPNFNQHHPDQNQFNNHNHSHYNYDSNQQMSGEANEPFIGGLFRP
NGRKRGRFHSSDYGDGGVNAKLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQ
QAYCFVKYATFEEADRAIRALHNQHTIPGEVAPFKVRYADGERERPVARCSMVGGFVDKL
YVGSINKLASKQEIEEIFSPYGHVEDVYIARDELKQSRGCAFVKFAHRDMALAAIKGLNG
TLTMRGCDQPLIVRFADPKKPKTGELRGSFAFGGPNFGPCSQQPMIRPAPGCFLPNASFS
MQQTSTTGVPQAVAHAAKQEFASPHITEQPLSSIKHSPSQLSQMPLQHMQAPEKCFQSPQ
QAIFDTHKQTQILEQQQNQQLALQEPAWTGNIQPASRNSVTSAVPPSPQIVDPGECDWSE
HSCPDGYKYYYNCITCESRWEKPVEITLFLQQFQEEKRLHGSNQQSSLSPVCSAEEVDQT
QKELDRVQIQSETSPVIDPSCV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaaagacacagaggagaccatcaacggcatcacgagcttcaacatcccaactttaac
cagcaccaccccgaccagaaccaattcaacaaccacaaccacagccattacaattacgac
tctaatcagcagatgagtggtgaagctaacgagccatttattggtggattattccgcccc
aatggccgcaaaagaggccgattccattcttcagattacggtgatggtggtgttaatgca
aagctttatatcgcaccaattccaagaacaacgactgaagaaaatatccgctctttgttt
gaagaacatggaagtgttgttgaggttgttttaccccgggataagcggactgggcaacaa
caagcatattgttttgtgaaatacgcgacatttgaggaagctgacagggctattagggct
ttgcataatcagcatacgattcctggggaagtggctccatttaaagtcagatatgctgat
ggagaacgggaacgcccagttgcccgctgttccatggtagggggatttgtggacaagctc
tatgttggttctataaacaagctggcttcaaaacaggaaattgaggagatattttctcca
tatggtcatgtggaagatgtctacattgcacgtgatgagctgaagcaaagtcgtggatgt
gcatttgttaagtttgctcacagagatatggcactggcagcaatcaaaggattaaatgga
actcttaccatgagagggtgtgatcagccattgattgttcgttttgcagatcccaaaaaa
cctaagactggagaattaagaggcagtttcgcatttggtggtccaaattttggtccctgc
tctcaacaaccaatgatcaggccagcacctgggtgttttttgcctaacgcttcattttct
atgcaacaaacctcaacaactggagttccacaagctgttgcccatgcagcaaaacaggaa
tttgcatctcctcatatcacagagcaaccactttcttcaataaagcactcaccttcacag
ttgtctcagatgccattacagcatatgcaggctccagagaaatgttttcaatcacctcaa
caagcaatttttgatacacataaacagacccaaattttagagcagcagcagaatcaacag
cttgccctgcaggagccagcttggactggaaacattcaaccagctagtcgtaattctgtc
acctctgcagtgcctcccagtccccaaatcgtagatccaggagagtgtgattggagtgag
cattcctgcccagatggatacaagtactattataattgtatcacctgtgaaagtagatgg
gagaagcctgtggagatcaccttatttctgcaacaattccaggaagagaaaaggctgcat
ggttcaaaccagcaatcttccctctcgccagtttgttctgctgaggaagttgatcaaaca
caaaaggaactagatcgtgtgcaaatacaatcagaaacaagtcctgttattgatccctcc
tgtgtttaa
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