Populus trichocarpa (black cottonwood): 7481432
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Entry
7481432 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7481432
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7481432
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7481432
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7481432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Trehalase
Actin_micro
Motif
Other DBs
NCBI-GeneID:
7481432
NCBI-ProteinID:
XP_024451311
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Position
2:15150190..15154892
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AA seq
819 aa
AA seq
DB search
MDDSCAVCAEALEWVAYGACGHLDVCSTCVSRLRFICDDRRCCICKTESSVVFVTKALGD
YTRMINDFLLLPSEPKEGRMGSYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKEESND
GSKRRGKFRNINQLKGHLFHQHKLHMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSDV
DGSESERGGFMGHPMCEFCKKPFYGDNELYKHMSTEHYTCHLCQRQHPGQYEYYKNYDDL
EIHFRRDHFLCDDEGCLAKKFIVFQTEAELKRHNTIEHAGHMSRSQRNAALQIPTSFRYR
RSNEQDNRHGRGRTFRRDQSDNQLSIAIQASLEAAYSESTSRDRSSSAQAISDHVDLSDI
DPIVQPFESLSATDPETTLRYLQALGPSSRNAPLQESSFPPLFTTTSSGQQKAKDESESL
PNNTMATHLRRQNNRNATVVNSPQQWPAASRGHVSSSPALYRPTVDTSPLSSRSSASGPG
LSSYASSIQSHAQTRPAAVRGHPSAGSVGISGTTSRISSTASASNLADSGSLKPSVSDFP
PVSAVPMHKMPTSSQVVLNVEEFQTANKSLVEKIRAALENDEDRYTLFKDISGQYRQGSI
DTGEYLDYVQQFGLSRLIPELARLCPDAQKQKELVETYNASLRSSGKKENGWGRGSAQLK
GTNGSKEGKGIAENDSSSKDRLTDSFINTVRALQSNYKPVEDEAQLLSKDGYRAAKGKSN
VMLDERQMEPRIQNGSLSAGDGSSKNLKDGGTEKQRKKTSKVHRARLGDGSMAALLDLQN
SEPDPRETVENRIDDSSNSVGGLPVRGVWRKGGGQKLFP
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagctgtgcggtgtgtgcggaggctctagaatgggttgcatacggcgcgtgt
ggccatcttgacgtttgctccacgtgcgtgtctcggctccgtttcatatgcgacgatcgc
cgctgctgtatctgcaagaccgagtcatctgtggtttttgtcaccaaggctttaggggat
tatacaaggatgattaatgactttttgctcttgccatctgaaccaaaggagggtcgaatg
ggatcttactggtaccatgaggacacacaagcattttttgacgatgttgaccattataaa
atgataaaggctatgtgcagattgtcatgtagtgtatgtgacaaggaggaatcaaatgat
ggatccaagcgtcgggggaagtttagaaatattaatcagctgaagggtcatttatttcat
caacataaattgcatatgtgtagcctatgcttagaaggacgaaaggtttttatttgtgag
caaaagctatacactagagcacaattgaatcagcatataagcacgggtgattctgatgtt
gacggaagtgaaagtgaaagaggtggctttatgggacatcccatgtgtgaattctgtaaa
aaaccattctatggagataatgagttgtataaacatatgtcaaccgaacactacacctgt
catctatgccagaggcagcatccaggacaatatgaatattacaagaattatgatgaccta
gagattcacttccgtcgagaccattttctatgtgatgatgagggctgtcttgccaagaag
tttattgtctttcaaactgaagcagagttgaagagacataatacaattgaacatgctggt
catatgtctcgttctcagcgaaatgctgctctccagataccaactagctttcgatatcgt
cgaagtaatgaacaagataatcgtcatggaaggggacgaacattccgtcgtgatcaatca
gataaccaactctccatagccattcaggctagcctggaggcagcatattcagaaagcaca
tctcgtgatcgatcatccagtgcacaagcgatctctgatcatgtagatttaagtgatatt
gatccaatagttcagccatttgaatcattatctgctactgatcctgaaacaacattgaga
tatcttcaagccttggggccttcttctaggaatgcacctttgcaagaatcttcctttcct
cctctctttacgactacaagcagtggtcaacaaaaggccaaagatgaatcagaaagtttg
cctaataatacaatggcgacgcatcttcggcgccagaacaacagaaatgcaacagtagtc
aactcaccccagcagtggccggcagcaagccgcggacatgtatcaagtagtccagcacta
tataggcctacagtagatacatcacctttgagttcaaggagttctgctagtggacctggt
ctctctagttatgcaagttctattcagtcccatgctcagactcgacctgcagcagtccgt
gggcatccctcagctggttcagtggggatctcaggtactacaagtaggataagcagcact
gcatcagcctcaaatcttgctgactctggatcattgaagccctctgtctcagattttcct
ccagtttctgcagtgccgatgcacaagatgcctactagtagccaggttgtgctgaatgtg
gaagaatttcaaactgcaaacaagtcattggtggaaaagatacgtgctgctcttgaaaat
gatgaagatagatatactctttttaaagacatatctggacagtatcgtcagggttcaatt
gacacaggagagtacctggactatgtccagcaatttggcttatcacgtctcattcctgag
ctggctagactttgtcctgatgctcagaaacagaaagagcttgttgaaacctacaatgct
agtttgagaagcagtgggaagaaagagaatggctggggccgtggtagtgcccagttaaaa
ggcactaatggatccaaggaaggcaagggaatagctgaaaatgatagcagttcaaaggat
agattgacagatagctttattaatactgttcgagcactgcagtcaaattacaagcctgtg
gaagatgaggcgcagctgctgtcaaaggatggatatcgggctgccaaaggtaagtcgaat
gtcatgcttgatgagcggcaaatggaaccaagaatccaaaatggctctttatctgccggt
gatggatctagtaaaaacctaaaagacgggggtaccgagaagcaacggaagaaaacctcc
aaggttcatagagcaaggcttggtgatggctcaatggcggccctgttggatctccaaaac
tccgaacctgatcctcgcgaaacagtggagaacaggatagacgatagcagtaactcagta
ggagggttacctgtgcgtggagtctggagaaaaggtggggggcaaaaactctttccatga
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