Populus trichocarpa (black cottonwood): 7481433
Help
Entry
7481433 CDS
T01077
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type 1
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00196
Photosynthesis - antenna proteins
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
7481433
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pop00194
]
7481433
Photosynthesis proteins [BR:
pop00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
7481433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
7481433
NCBI-ProteinID:
XP_002302798
UniProt:
B9GSZ2
LinkDB
All DBs
Position
2:15132728..15133624
Genome browser
AA seq
266 aa
AA seq
DB search
MASMTLSSTFTSKAVPLNGITEFSSATCCGNGRVSMRKAAGKVAASGSPWYGPDRVKYLG
PFSGEPPSYLTDEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA
RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGG
PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
ENLADHLADPVNNNAWAYATNFVPGK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcatgacactttcatctactttcacaagcaaagctgttcctttaaatggaatc
actgagttttcatcagccacctgctgtggtaatggcagagtctcaatgaggaaggcagca
ggaaaggtagctgcttctgggagcccctggtacggtcctgaccgtgtcaagtaccttgga
ccattctctggcgagcctccatcttacttgactgatgaatttcctggtgactacggttgg
gacaccgcagggctatctgcagatcctgaaacgtttgccaaaaaccgggagcttgaggtt
attcattctaggtgggcaatgcttggagctttgggatgtgtcttccccgagcttcttgcc
aggaatggagtcaagttcggcgaggcagtgtggttcaaagctggtgctcaaatcttcagc
gagggtggtcttgactatttgggaaaccccagcctaatccatgctcaaagcattttagcc
atttgggcaacacaggtagtcctcatgggcgctgttgagggttaccgcattgcaggaggc
cccctcggtgaggtcaccgaccccttgtacccaggtggcagctttgatcccttggggctt
gctgatgatccagaggcatttgcagagcttaaagtcaaagaaatcaagaatgggagactt
gccatgttctccatgtttgggttctttgtgcaggccattgtgactgggaagggacctcta
gagaacctggccgaccatcttgctgaccctgtgaacaacaatgcttgggcttatgccacc
aactttgtacctgggaagtga
DBGET
integrated database retrieval system
