Populus trichocarpa (black cottonwood): 7481434
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Entry
7481434 CDS
T01077
Name
(RefSeq) pleiotropic drug resistance protein 3
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7481434
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7481434
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
7481434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC2_membrane_3
AAA_29
AAA_22
AAA_18
RsgA_GTPase
AAA_16
AAA_25
AAA
AAA_23
SMC_N
Rad17
AAA_30
AAA_28
AAA_33
NACHT
nSTAND3
ABC_trans_N
RNA_helicase
TsaE
PduV-EutP
AAA_5
RuvB_N
AAA_7
AAA_14
AAA_19
cobW
NTPase_1
AAA_15
Ploopntkinase3
NPHP3_N
ORC-CDC6-like
AAA_17
Viral_helicase1
AAA_11
ABC_ATPase
Spore_III_AA
ATPase_2
SRPRB
Mg_chelatase
T2SSE
Motif
Other DBs
NCBI-GeneID:
7481434
NCBI-ProteinID:
XP_024450834
LinkDB
All DBs
Position
2:complement(15086778..15096533)
Genome browser
AA seq
1452 aa
AA seq
DB search
MAAPVTRNDHKTDSLRMELEESTEKSIMTSFHNHAPSFIGSAATNCDATSLSSLEENEDE
IELQWAAIERLPTFRRLRLSLFDKKEDGEGEEGKRVVDVTKLEALERHVFVDKLIKKIEE
DNCRLLSKFKERMDKVGLELPTVEVRYRNLSVEVEYEVVHGKPLPTLWNTLKTAFGGIAN
ITGCKSVRNKIKILKNVNGIIKPSRMTLLLGPPGCGKTTLLQALTAKLDQSLKVEGEISY
NGYKLNEFVPQKTSVYISQYDQHISEMTVRETLDFSARCQGIGGREDIMKEISRREKEAG
IVPEPDVDTYMKATSVEGLKRTLQTDYILKILGLDICADTMVGDAMRRGISGGQKKRLTT
GEMIIGPTKALFMDEISNGLDSSTTFQIVSCMQQLAHITKSTMLVSLLQPAPEIFDLFDD
IILMAEGKIVYHGPRDNVLEFFEHCGFRCPPRKGIADFLQEVVSERDQGQYWYHKQQPHS
YVSIDMLVKNFQEFHVGQKLEGELSRPLQKSESHKNALSFSIYSLRKWELFKVCMDREWL
LMKRNLSLHVFKSVQLVVTALITMTVFIRSRMDIDMVDGNLYMGSLFYALIRLMCNGITE
LSLTIQRIAVFYKQRDFYFYPAWAYSVPAAILKIPFSLLDAFLWTALTYYVIGFSPEPER
FFYHFFLLFLVHQVSVSMFRLIASIVRNPSIASTFALFIILITFLFGGFVIRQPSLPSWL
RWGFWLSPLAYAEIGASLNEFLAPRWQKVSSSNITLGQKILESRGLYFNEYFYWIPLGAL
IGFWIIFNIGFTCALSYSKAPRRSRTIISQERLSNILKRKQDLSDFPRAETPKPAAEMEK
IKMILPFEPITISFQNVQYFVDTPKILRKQGLPQKRLQLLHDITGAFRPGILTALMGVSG
AGKTTLMDVLSGRKTGGIIEGEIRIGGYPKAQKTYARISGYCEQTDIHSPQITVEESVMY
SAWLRLPAQIDNRTRSEFVAEVIEMIELGEIRDELVGIPGVSGISTEQRKRLTIAVELVS
NPSVIFMDEPTSGLDARAAAIVMRVAKNIVNTNRTVVCTIHQPSIDVFEAFDELILMKRG
GQIIYSGELGQNSSKLIEYFEGIHGVPKIKENHNPATWMLEVTGSSMEARLGLDFANLYR
DSHLFQKNEELVARLGLPEQGSKELHFSTRFPQNAWEQFKACLWKQELSYWRSPKYNLVR
LIFIIVSSLIFGALLWQKGQKINGEQDFFNILGSIFIFIQFAGIANCSSVMPFVATERTI
VYRERFAGMYSSWAYSSAQVIVEIPYILLQAVLFLMITYPAINFYWSAYKVFWYFYSMFC
TLLYFNYLGLLLVSLTPNFQMAAIWASFFYTLTNLFSGYLVPEPKMPRWWAWGYWICPIS
WSLKGLLASQYGDIEAEITAYGERKSISSFLRSYFGYKQDDLGVVAIVLLAFPVFFALAF
AITIAKLNFQKR
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctgtcacacgtaacgaccataaaacagattccctgaggatggagttggaa
gagtcgacagagaaaagcatcatgacatcatttcataaccatgcaccaagcttcattggt
agtgctgcaactaattgtgatgcaacatccttatccagcttggaagaaaacgaagatgaa
attgagctacagtgggcagccattgaaagactacccacttttagacggcttaggctgtca
ttgtttgacaaaaaggaagatggcgaaggagaggaaggcaagagggtggttgatgttacc
aagcttgaagctcttgaacgccatgttttcgtcgacaaacttataaagaagatcgaggaa
gataattgcaggctgttaagcaagtttaaagaaagaatggacaaggtgggtctggaattg
ccaactgtggaagtgagatatcggaatttgtctgtggaggtggaatatgaagtggttcat
ggaaagccccttcctactctttggaacaccctcaagactgcatttgggggtattgcaaat
attacgggatgcaagtcggtacgaaacaagattaaaattctcaaaaacgtcaacggcatc
atcaagccctcaaggatgactctcttgcttggtcctccaggttgtgggaagaccacttta
ttacaggcacttacagcgaagcttgaccagtccttgaaggtcgagggggaaatttcatat
aatggttacaaactcaatgagtttgttcctcagaagacatcagtttacataagccaatat
gaccagcacatttctgaaatgactgtgagggaaaccctcgacttttctgctcgttgtcaa
ggcattgggggcagagaagatatcatgaaagaaatcagtagaagggagaaggaagctggt
attgtcccagaaccggatgtagatacctacatgaaggcaacttcagttgaaggattgaaa
aggactctccagacggactatatcttgaagatccttggactggacatatgtgctgataca
atggtgggagatgcaatgaggagaggaatttcaggtggtcaaaagaaaaggctaacaaca
ggggaaatgataattggtccaacaaaagcgctctttatggacgaaatatccaatggctta
gacagctcaaccaccttccagattgttagctgcatgcaacaattggcacacataacaaaa
tcaaccatgttggtttcacttcttcagccagctcctgagatctttgatctcttcgacgac
attattttgatggcagagggaaagatagtataccatgggcctcgagacaacgttctggag
ttctttgaacattgtggttttaggtgcccaccacgaaagggcattgctgacttcctccaa
gaagtagtttctgaaagggatcaaggacagtactggtatcataaacagcaacctcatagt
tatgtttctatcgatatgcttgtaaagaatttccaggaatttcatgtgggacagaagcta
gaaggggagctctccaggcctttacagaaatctgaaagtcataaaaatgctctgtcattc
agcatctactccttaagaaaatgggaactattcaaagtttgtatggatagagaatggctg
cttatgaagcgaaacttgtctcttcatgtattcaaatcagtacagctcgtggtcactgca
ttaattacaatgacagtgttcatacgtagtcgaatggatattgacatggtcgacggcaac
ctatacatgggttccttgttttatgctctaattagattaatgtgcaatgggattaccgaa
ttgtcattgactatacaaagaatagcagttttctacaagcaaagggatttctacttttat
cctgcgtgggcttattctgttccagctgccattttaaagattccgttttcattgctagat
gcatttctttggacagctcttacctattacgttattggtttcagtcctgaaccagaaagg
tttttctaccacttctttcttctgttccttgttcatcaagtgtctgtatcaatgttccgt
ctgattgcttccatagttcggaatccatctattgcatcaacattcgctcttttcattata
ttaatcacatttctatttggtggatttgtaattcgacaaccttcgttaccttcttggttg
aggtggggcttttggctctctccactggcatatgcggaaatcggtgcatctttaaacgaa
ttccttgctccgaggtggcaaaaggtttcatcttccaatattacattaggtcagaaaatt
ctcgaaagccggggactatacttcaatgaatacttctattggatacctttaggagcatta
attggattctggataattttcaacattggattcacctgcgccctcagttattcaaaagcc
cctcggagatctcggaccataatttctcaagaaaggctctccaatattctaaagagaaaa
caagatttgagcgactttcctcgcgctgaaacaccaaaacctgccgcagaaatggagaaa
atcaaaatgattttgcctttcgagcccataacaatatcctttcagaatgtgcaatatttt
gtcgacactcctaagatattaagaaagcaaggtcttccacaaaaaaggctgcagcttctt
catgatatcactggtgccttcagacctgggattcttacggcattgatgggtgttagtgga
gctgggaaaacaacactaatggatgttctttctggaagaaaaactggtggcattattgaa
ggcgagataagaattggagggtaccctaaagcccaaaagacgtatgctagaatatctggt
tattgtgaacaaacagatattcattctccacagattacagtagaagagtcagtaatgtac
tcagcttggttgcggttgccagctcagattgacaataggacaagatctgaatttgtagca
gaagttattgagatgattgagcttggtgaaatcagagatgaattagttggcatccctggt
gttagtggtatatcgaccgagcagcgaaaacggctaactattgccgtagaacttgtttcc
aatccatctgtaatattcatggatgagcccacctctggtctggatgccagagcagctgca
atcgtcatgcgagttgcaaagaacattgttaatacaaacaggacagttgtgtgcacaatt
caccagccaagtattgatgtttttgaggcatttgatgagctcattttgatgaaacgagga
ggacaaataatatattctggagagctgggtcagaattcaagtaagcttattgagtatttt
gagggcattcatggagttcccaaaatcaaagaaaatcacaaccctgcaacatggatgtta
gaggttaccggttcttctatggaagctcgacttggtttagattttgcaaatctctacagg
gactcccatctcttccagaaaaatgaagagctagttgctagactgggccttccagaacag
ggttcgaaggaattgcatttctccacccgatttccacaaaatgcatgggaacaatttaag
gcgtgcctttggaaacaagaattgtcctactggagaagtccaaaatataacttggttcgg
ttgatatttatcatcgtgtcttctttgatattcggagcacttctttggcaaaaaggacag
aaaataaatggtgaacaggacttcttcaacatactgggatctattttcatctttattcag
ttcgccggaatagccaactgctcatctgttatgccatttgtagctactgaacgcaccatt
gtataccgggaaaggtttgctggaatgtactcttcgtgggcgtactcgtctgcacaggtg
attgtagaaattccatatatattgctccaagctgtgctgtttctgatgattacatatcca
gcaataaatttctactggtcagcttacaaagtattttggtacttctactcaatgttctgc
acattgctctatttcaattacctgggattgctgcttgtctcattgaccccaaatttccaa
atggctgcaatatgggctagtttcttctataccctcacgaatttgttctcgggctacctt
gtaccggaaccgaaaatgcctagatggtgggcttggggctattggatttgtccaatttca
tggtccttgaaaggccttctggcatcacagtacggtgatatagaagcggaaatcacagca
tatggagagcgaaaatcaatcagttccttcttacgaagttattttgggtataaacaagat
gatttaggtgtagtggcaattgttcttcttgcttttccagttttctttgcactcgctttc
gcaattaccatagcaaaactgaacttccaaaaaaggtaa
DBGET
integrated database retrieval system
