Populus trichocarpa (black cottonwood): 7481461
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Entry
7481461 CDS
T01077
Name
(RefSeq) elongation factor Tu, mitochondrial
KO
K02358
elongation factor Tu
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7481461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pop03012
]
7481461
03029 Mitochondrial biogenesis [BR:
pop03029
]
7481461
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7481461
Translation factors [BR:
pop03012
]
Eukaryotic type
Elongation factors
7481461
Prokaryotic type
7481461
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
7481461
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7481461
Exosomal proteins of breast cancer cells
7481461
Exosomal proteins of colorectal cancer cells
7481461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
Ribosomal_S8
GTP-eEF1A_C
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
7481461
NCBI-ProteinID:
XP_024449891
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Position
2:complement(20222379..20227009)
Genome browser
AA seq
447 aa
AA seq
DB search
MASLALRNPNSKRLLPFSSQFYCCCRGSPSSLTESLHSSNDRTSSSPWWRSMATFTRTKP
HVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYE
TAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTKEHILLARQVGVPSL
VCFLNKVDVVSDPELIELVEMEVRELLSFYKFPGDEIPIVRGSALSALQGTNEEIGKKAI
LKLMDAVDEYIPDPVRQLEKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEILGLS
KEGPKRTTVTGVEMFKKLLDQGQAGDNVGLLLRGLKREDVQRGQVIAKPGTVKTYKRFEA
EIYSLTKDEGGRHTAFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAIFELILPV
PLEKGQRFALREGGRTVGAGVVSKVLQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttggcccttagaaaccctaattcgaagcgacttttaccattctcctcacaa
ttctactgctgctgccgaggatcgccatcctcccttaccgaatctcttcactcgtcaaat
gacagaacctcttcttctccatggtggagatccatggccaccttcaccagaactaaacct
catgtgaatgtgggaacaattggacatgttgatcatggcaagactaccttgactgctgct
attacaaaggtgctagcagaagaagggaaagccaaggccattgcttttgatgaaattgac
aaggcccccgaagagaaaaagagaggaattacgattgcaacggcccacgtggagtatgaa
actgctaagcgtcactatgcccatgtggactgccctgggcatgcagattatgttaaaaat
atgattactggagctgctcaaatggatggcggaattctggttgtatctgctgctgatggg
cccatgccacaaacaaaggaacatattttgcttgctcgccaggttggtgtaccatcactc
gtgtgctttctgaataaagttgatgttgtatcagatccagagttaatagagcttgtggaa
atggaagtccgagaactacttagtttctacaagtttcctggagatgaaatccctattgtt
cgaggatcggcattgtctgcattacagggtacaaatgaggaaataggcaagaaagccatt
ttaaagttgatggatgctgtggatgaatacattcctgaccctgtgcgtcaactcgaaaag
cctttcttgatgccaatagaagatgttttctcaattcagggacgtggaacggttgcgact
ggacgtgttgaacaagggaccatcaaagttggtgaagaagttgaaattttgggactatca
aaagaaggtcctaagagaactacagtgactggtgttgagatgttcaagaaattgttggat
caaggacaggctggagacaatgtgggtcttctccttcgtggtttgaaacgagaagatgtg
caacgtgggcaggttattgccaagcctggaactgtgaaaacttacaagagatttgaggca
gaaatatactccctcacgaaggatgaaggagggcgtcatactgcgtttttctccaactac
agacctcagttttacttgcgaactgcagatatcactggaaaagtagagttgccagaaaat
gttaagatggtcatgcccggggacaacgtgaccgcaatctttgagctaatcttaccagtt
cctcttgaaaaaggacaaaggtttgccttgagggaaggaggtagaacagttggagcaggg
gtagtctcaaaagtgcttcagtga
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