Populus trichocarpa (black cottonwood): 7481530
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Entry
7481530 CDS
T01077
Name
(RefSeq) scarecrow-like protein 30
KO
K27753
GRAS family protein LISCL
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7481530
Transcription factors [BR:
pop03000
]
Eukaryotic type
Other transcription factors
GRAS
7481530
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
7481530
NCBI-ProteinID:
XP_002314169
UniProt:
B9HPF5
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All DBs
Position
9:4369271..4371464
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AA seq
656 aa
AA seq
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MVIESMEPPSFPNILQAPTLGSSSDEDTAYSSDTNDFSHVVFKYINDMLMEDDLGDKTCM
LQDCLALQAAEKSLYDVLGEEHPPSSDHRPPCLAQINESADENYTPTTSVQSSVLQSFYS
PESVFVVPYVHTETHSFRQFNGVTGSANKLLPYSHSVKFSSMRKASDPPEPEEEVVADRI
QNNGENYSSNQTRGRRNYQYDSNDYLEEGRSKKQPSVSESTHWELLDDDFLHSIESGVHI
SCPLYDNSRSAAYNKFLHNEQLTASHMRMRTLANKRETDQWTQLILCAEAAGRGDQKTAS
AKLKQIRQHSSPFGDANQRLAHYFANGLEERLAGTGMLLSGPITQNSTTAADILKAYQLY
VTICPFRKMTNLCANRTIARVADKATSVHIIDFGISYGFQWPCFMYRHSLRPGGPPKIRI
TGIDLPQPGFRPAERVEETGRRLKRLADRMNVPFEYNAIAQKWETIQYEDLKIARDRDEV
IVVNCMYRFKNLPDDTMASNSPRDAVLKLIKRINPDVFLHGVRNGSYNAPFFVKRFREAL
FHYSAYFDMLEANAPREDQERLLFEREMIGRDVINVVACEGTQRIERPETYKQWQMRNLR
NGFRQIPLHQSIIKRMKSIKPDYHKDFIVDEDGQWVLLGWKGKIFHAISAWKPVQE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggtgattgagtccatggaaccaccttcctttccaaacattttacaagctcctacttta
gggtctagctcagatgaagatactgcatatagcagtgatacgaatgacttctctcatgtt
gttttcaagtacataaatgacatgttaatggaagatgatttgggagataaaacctgtatg
ttacaggactgtctcgctctccaagctgctgaaaagtctctttatgatgtcctcggagaa
gagcatccaccttcttcggatcaccgccctccttgtttggctcaaatcaatgagagcgca
gatgagaattacactccaactacaagtgttcaatcatctgttttacagtcgttttactct
cctgaaagcgtctttgtggtgccgtatgttcatacagaaacgcattcttttaggcagttc
aatggagtcacgggaagtgctaacaagctccttccatatagtcattctgtgaaattttct
tcaatgaggaaggcatcggatcctccagagccagaggaagaggtggtagcagacagaatc
cagaacaatggagagaactactcatcaaatcagacaaggggaaggagaaattatcaatat
gacagtaatgactacttagaagaagggaggagcaagaagcaaccttcggtctcagagtcc
acacactgggagcttcttgatgatgactttctgcacagtatcgagagtggagtacacata
tcatgtcctctgtatgataattcacgaagtgcagcgtacaataagtttctgcataatgag
cagttaacagcatctcatatgcgcatgagaacactggctaataaaagagagacagaccag
tggactcagctaattctttgtgcagaagctgcaggaagaggtgatcaaaagacagcaagt
gcgaaattaaaacagattaggcaacattcttctcctttcggggatgcaaatcaaagattg
gcacattatttcgctaatggcctcgaggaacgccttgccggcactggaatgttactctct
ggacccattacacaaaattcgacaacagctgctgacatcctgaaagcttatcagctttat
gttacaatatgtcctttcaggaagatgacaaatttgtgtgcaaaccgaacaattgcgagg
gtagcagataaggcaacaagcgtgcacatcattgattttggcatcagctatggatttcaa
tggccttgctttatgtaccgtcattcattaaggcctggtggacctcccaagattcgcatt
acgggaattgatcttccccaaccaggttttcggcctgcagaaagggttgaagagactggc
cgtcgtttaaaaagattggctgacagaatgaatgttccgtttgagtacaatgccatagcc
cagaaatgggaaactattcaatatgaggatctcaagatcgctagagatcgagatgaggtg
attgttgtcaactgcatgtaccgattcaagaacttacctgacgacacaatggcgtccaac
agccccagggatgctgttcttaaattgatcaagagaatcaatcctgatgtattcctccat
ggagtgcgtaatggctcttacaatgctcccttctttgtcaaaaggttccgcgaagcattg
ttccattactctgcgtattttgatatgctcgaagccaatgcacctcgagaagatcaagaa
agattgctgttcgagagagaaatgattggaagggatgttataaatgtggtagcatgtgag
ggtacacaaaggattgaaaggccagagacatacaagcaatggcagatgaggaatttgagg
aatggatttaggcagatcccattacatcaaagtatcataaaaaggatgaaaagcattaaa
cccgattatcataaagactttatcgttgatgaggatggacaatgggtacttcttggatgg
aagggaaagatatttcatgctatttcagcttggaaacctgtccaggagtaa
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