Populus trichocarpa (black cottonwood): 7481696
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Entry
7481696 CDS
T01077
Name
(RefSeq) protein SUPPRESSOR OF QUENCHING 1, chloroplastic
KO
K28146
NHL repeat-containing protein 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
7481696
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Gene cluster
GFIT
Motif
Pfam:
NHL
HAD_2
Hydrolase
Thioredoxin_8
TEN_NHL
Redoxin
AhpC-TSA
SGL
Thioredoxin
DUF5128
Hydrolase_like
Thioredoxin_2
Fn1-VW_OTOGL
Motif
Other DBs
NCBI-GeneID:
7481696
NCBI-ProteinID:
XP_024439693
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Position
13:complement(501361..511824)
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AA seq
1093 aa
AA seq
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MKGQAMAMKLLSPPSSLSSPRFAKSLFFFTSNPKGSKPISSLVQLFQRRSKNLVFNKKME
VKACVKVEQKSETEVTGNEWGKVSAVLFDMDGVLCNSEEPSRMAGVDVFAEMGVEVTVDD
FVPFMGTGEANFLGGVANVKGVKGFDTEMAKKRFFEIYLDKYAKPNSGIGFLGALELITQ
CKNKGLKVAVASSADRIKVDANLAAAGLPVSMFDAIVSADAFENLKPAPDIFLAASKILG
VPTSECIVIEDALAGVQAAKAAQMRCIAVTTTLSEEILNDASPSLIRKEIGNISLDDILD
GGSGGYNEKMQGPQVLHTSAQTSVAMLEERTENGSILNQVATNDNVSSIKGLQGSRRDIV
RYGSLGIALSCLYFTITNWKAMQYASPKGIWNKLFGVDTPSFEQNESIGNLKSSRVKQFV
KYISDLETKGNATIVPEFPGKLDWLNTSPLQFQRDLKGKVVLLDFWTYCCINCMHVLPDL
EYLEKKYKDAPFTVVGVHSAKFDNEKDLEAIRNAVLRYNISHPVVNDGDMFLWRELGVSS
WPTFAIVGPNGKLIAQLSGEGRRKDLDDLIEAVLLYYGERKILNSRPIPLSLEKNNDPRL
LSSPLKFPGKLAIDVLNNRLFISDSNHNRIVVTDLDGNFIAQIGSSGEEGLRDGSFDDAT
FNRPQGLAYNSKKNILYVADTENHALREVDFVSEKVRTLAGNGTKGSDYQGGGKGTDQVL
NSPWDVSFEPVNEKVYIAMAGQHQIWEHDISNGVTRAFSGDGYERNLNGSSPTSTSFAQP
SGVSLSPDFELYVADSESSSIRVLSLRTKGTRLLAGGDPIFPDNLFKFGDHDGIGSEVLL
QHPLGVLHAKDGLIYIADSYNHKIKKLDLATKRVTTIAGTGKAGFKDGKALTAQLSEPAG
LIEAENGRLIIADTNNSVIRYLDLNKGEAELLTLELKGVQPPASKSKSLKRLRKRSSADT
ETIKVDGCSSSEGNMRIKISVPEEYHFSKEARSKFSVETEPENTVLIDPSEGYLSSGGTA
SIHFKRSDASPSMGRINCKVYYCKEDEVCLYQSLLFEVPFQEETPDSTPSEITLAYFVKP
KSSPSNLQLPITG
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggccaagccatggccatgaaactactatcccctccatcttctctatcaagcccc
agatttgctaaatctcttttcttttttacttccaatccaaaagggtcaaaacccatctca
agtttagtccaacttttccaacggaggtcaaaaaatttagtctttaataaaaaaatggaa
gtgaaggcatgcgtgaaggtggagcaaaagagtgaaactgaagtaacaggaaatgagtgg
ggtaaggtatctgctgtgctttttgatatggatggagtgttgtgcaatagtgaagagcct
tcaagaatggcaggtgttgatgtttttgctgagatgggagttgaagttacagtggacgat
tttgtgccattcatgggcacaggtgaagcaaacttcttaggaggtgttgctaatgtaaag
ggagtcaagggattcgataccgaaatggcgaagaaaaggttctttgagatatatctagat
aagtatgcaaaaccgaattccggaataggattcctaggtgcccttgaactcattactcag
tgtaaaaacaaaggcctgaaagttgctgttgcatctagtgctgatcgtatcaaagttgat
gctaatttagcagctgctggcctaccagtatcgatgtttgatgctattgtatcagcagat
gcttttgagaatttgaaaccagctcctgacattttcttggctgcatcaaaaatcttgggt
gtgcccactagtgagtgtattgtcattgaagatgcactagctggagtacaggctgcaaaa
gctgcacagatgagatgcattgctgtcaccactacattgtcggaagaaattctaaatgat
gccagcccatctcttatcagaaaggagattgggaatatttcgcttgatgatattctcgat
ggtggatctggtggctataatgagaagatgcagggacctcaggttctgcacacttctgca
caaacttcagtagcaatgctcgaagaaagaacagaaaatgggtcaatccttaaccaagtt
gctaccaatgacaatgtttcctcaattaaggggttgcagggttctcggcgtgatatagtg
agatatggcagtttgggtattgctctttcttgtctgtacttcaccatcacaaattggaag
gcaatgcaatatgcttcacctaaaggtatatggaacaagttgtttggagttgatacccca
tcctttgaacagaatgaaagtataggcaacttaaaatcttcaagagtcaaacagtttgta
aagtatatatctgatctagaaaccaagggaaatgccaccattgtgccagaatttccagga
aaacttgattggctgaatacatctccacttcagtttcaaagggatctgaaaggaaaagtg
gttctgctggatttttggacatattgttgtataaattgtatgcatgtcttaccagatcta
gagtatctggagaagaaatacaaagatgcaccgttcactgttgtgggggtacattcagct
aagttcgacaatgagaaagatttagaagccatccgtaatgcagtcttacgctacaacatc
tctcacccagttgtcaatgatggagatatgtttttgtggcgtgagctaggtgtcagttcc
tggcctacatttgccattgttggacccaatggtaagcttattgcacaattatcaggagaa
ggccgccgaaaggatcttgatgatttaatagaggcagtgcttttgtattatggtgaaagg
aagatcctgaacagcagaccaattcctttgagtttagagaaaaacaatgatcctcgctta
cttagctctcctttgaagtttcctggaaagttggctattgatgtgctaaacaaccgactg
ttcatttccgatagcaaccacaaccgcatagtggtcactgatctagatggaaattttatt
gcccaaattggcagcagtggagaggaaggactgcgagatggttcttttgatgatgccacc
tttaatcgccctcagggtctggcttataattcaaagaaaaatatcctttatgttgcagat
actgaaaaccatgctttgagggaggttgattttgtcagtgagaaagtgcgaactcttgct
ggaaatggaacaaaaggttctgattaccaaggaggtggaaaaggaacagatcaggttctc
aactccccatgggatgtctcctttgagccggttaatgagaaagtttacattgcgatggct
ggtcaacatcagatatgggagcatgacatatcgaatggagttactagagccttcagtggt
gatggttatgaaagaaacttgaatggatcaagccctacgagcacatcatttgctcaacct
tctggagtttcattatctcctgatttcgagctatatgttgctgatagtgaaagtagctcc
attcgagtgcttagtctaagaaccaaaggaacaaggttgctagctggtggtgatccaatt
ttccctgacaacttgtttaagtttggagaccatgatggtataggttccgaggtacttctt
caacatccattgggtgtattacacgccaaggatggtctaatatacattgcagatagctat
aatcacaagatcaagaagttagacctagctactaaaagggtcactacaatagcaggaacg
ggaaaagctggtttcaaggatggaaaagccctaactgcccagctctcagagccggcggga
ctcattgaagctgaaaatggaaggcttatcatagctgatacgaacaacagtgttatcagg
tatctagacctgaacaagggagaagctgaacttctaactttggagctgaaaggagttcag
cctccagcatcaaaatccaaatccttgaaacgtctcaggaagcgatcatcagctgacaca
gagacaatcaaagttgatggttgttcatccagcgagggcaacatgcgtatcaaaatatca
gtacctgaagagtatcatttctcaaaggaagcacgcagtaaattcagtgttgaaactgag
cctgaaaacacagtgctgattgatccctccgaaggctatctaagttctggaggaacggca
agcattcactttaagagatctgatgcctcaccttcaatggggagaataaattgcaaggtt
tactattgcaaggaagatgaggtctgcttataccaatcacttctctttgaggtacccttc
caagaagaaactccagactcgaccccatcagaaatcacacttgcatattttgtgaagccc
aaatcttcaccaagcaatttgcagctaccaattaccgggtga
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