KEGG   Populus trichocarpa (black cottonwood): 7481716
Entry
7481716           CDS       T01077                                 
Name
(RefSeq) geranylgeranyl transferase type-2 subunit beta 1
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:pop01006]
    7481716
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7481716
Enzymes [BR:pop01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     7481716
Prenyltransferases [BR:pop01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   7481716
Membrane trafficking [BR:pop04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    7481716
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    7481716
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_N SQHop_cyclase_C Rop
Other DBs
NCBI-GeneID: 7481716
NCBI-ProteinID: XP_052302394
LinkDB
Position
13:complement(826687..830345)
AA seq 346 aa
MKDSSLASLISRSPRSPSPSLVPPSDSPPRFPLMGELVVDKHVKYILSVEKRKDSFESVV
LEHLRMNGAYWGLATLDILGKLDALDSNEVIEWIMKCQHESGGFAGNIGHDPHMLYTLSA
VQVLALFDKLNVLDADKVANYISGLQNEDGSFSGDEWGEVDSRFSYLAICCLSILHRLDK
INVEKAVNYIASCKNVDGGFGCTPGGESHAGQIFCCLGALAITGSLHHVDKDLLGWWLCE
RQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILNCQDTENGGISDR
PEDAVDVYHTYFGVAGLSLLEYPGLKAIDPAHALPVDVVNRIFFQK
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgaaagattctagcttagcttctctgatctctcgctctccccggtccccatctccctcc
ctagtccctccctctgattcaccaccaagatttccgctgatgggagagttggtggttgat
aaacatgttaagtacattttatcagttgaaaagagaaaggatagtttcgaatcggtggtg
ttggagcatttaagaatgaatggagcgtattggggattggctactttggatattttagga
aagcttgatgctttggattcaaatgaagttattgaatggatcatgaagtgccagcatgag
tctggtggatttgctggtaatattgggcatgacccccatatgctgtatacccttagtgct
gtacaagttttggccctttttgataagctaaatgttctggatgctgataaagttgcaaat
tatattagtgggctgcaaaatgaagatggatcgttttctggggacgagtggggagaagta
gactcccggttttcatatcttgcaatatgttgtctgtctattttgcatcgtctggataaa
ataaacgtggagaaggcagttaattacatcgcaagttgcaaaaatgtggatggtggattt
ggatgcactcctggtggagagtctcatgctggccagattttctgttgtttgggtgctctt
gctatcacggggtctctgcatcatgttgacaaggacctccttggttggtggctatgtgaa
cgccaagtcaaatctggaggtctaaatggtcgccccgagaaacttcctgatgtttgctat
tcatggtgggttctttctagcctgattatgattgacagagttcattggattaacaaggac
aagctagttaagttcattttaaactgtcaggatacagaaaatggaggaatttcagataga
ccagaagatgctgttgatgtataccatacatattttggagtagctgggctttcgcttctt
gaatatccaggattgaaagccatagatccagctcatgctctacccgttgatgttgtaaac
aggattttcttccagaaatag

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