Populus trichocarpa (black cottonwood): 7481730
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Entry
7481730 CDS
T01077
Name
(RefSeq) 26S proteasome regulatory subunit 6A homolog A
KO
K03065
26S proteasome regulatory subunit T5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7481730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7481730
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
7481730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
nSTAND3
AAA_5
AAA_16
AAA_2
RuvB_N
AAA_22
DUF815
AAA_14
AAA_7
Mg_chelatase
Parvo_NS1
TIP49
PhoH
AAA_33
AAA_19
TRAF_BIRC3_bd
ATPase
IstB_IS21
AAA_24
AAA_11
RNA_helicase
AAA_28
AAA_25
AAA_18
TsaE
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
7481730
NCBI-ProteinID:
XP_002319515
UniProt:
B9I7I1
LinkDB
All DBs
Position
13:complement(1043845..1047492)
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AA seq
423 aa
AA seq
DB search
MATPMVEDSSFEDDQLASMTTEDITRKSRLLDNEIRILKEEVQRTNLELDSYKEKIKENQ
EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
ELVEAIVLPMTHQERFQKLGIRPPKGILLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVH
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN
YYA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccgatggtggaggattcaagcttcgaagatgaccagcttgcctccatgact
actgaagatatcacaagaaagtctcgtcttcttgataacgagattcgcattctcaaggaa
gaggtgcagagaacgaatctggagctggattcatataaggagaagataaaggagaatcaa
gagaagattaaactcaacaagcagctgccatacctggttggcaacattgtcgagattttg
gaaatgaacccagaagacgaggctgaagaagatggggcaaacattgaccttgactctcaa
aggaagggtaaatgtgttgtgctgaaaacatcaactcgtcagactatttttcttcctgtt
gttgggcttgttgatcctgacaagttaaaacctggggacctggttggagtcaacaaagat
agctacctgattttggatactctaccgtcagaatatgattcacgagttaaggccatggag
gttgatgaaaaacccacagaagactacaatgatattggaggcttggagaagcagatccaa
gaattagttgaggctattgtattgcccatgactcaccaagagcgatttcagaagttgggt
attcgtcctcccaaaggtatcctcttgtatggacctcctggaactgggaaaacattgatg
gcccgtgcttgtgctgcacaaacaaatgccactttcttaaagttggcaggcccacaactt
gttcagatgttcattggagatggagccaaacttgtccgtgatgccttccagcttgcaaaa
gagaaatctccctgcatcatttttatagatgaaatcgatgctattggcacaaagcggttt
gacagtgaggttagtggagatagggaagtgcagaggaccatgttagaattgctcaatcag
cttgatggctttagcagtgatgacaggattaaggtgattgctgcaacaaatcgtgctgat
atcctggacccagccctcatgcgatcaggtcgactggatcgcaaaattgaatttccacat
ccaagtgaagaagctagagctcgaattttgcagatccattcaaggaagatgaacgtccat
cctgacgtgaactttgaagagcttgctcgctccacagatgattttaatggggcacagctg
aaagcagtttgtgtcgaagctgggatgctagctcttcgccgtgatgcaacggaggtgaat
catgaggattttaatgaaggtatcatccaggtgcaagcgaagaaaaaagccagtcttaat
tattatgcataa
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