Populus trichocarpa (black cottonwood): 7482089
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Entry
7482089 CDS
T01077
Name
(RefSeq) transcription factor LAF1
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7482089
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
7482089
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
7482089
NCBI-ProteinID:
XP_002318818
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Position
12:15271603..15274123
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AA seq
293 aa
AA seq
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MGCKSSDKPKPKLRHRKGLWSPEEDQRLGSYVFQHGHGCWSSVPINAGLQRTGKSCRLRW
INYLRPGLKRGAFSTDEEETILTLHRMLGNKWSQIAQHLPGRTDNEIKNHWHSYLKKKLF
KAEGMESPNKTQSASSNSDNMDLSPSPKRLKMQSPESSMNMEKPSTDIDRPVLPRMFDYL
KEPNRSSLLPKVMFAEWLSLDSFASSGEPVVSKSTFDHNPSFQDTSFMHHYLLEEGAFGG
DYQNSLSDGSSGDIFSSEFKFESQSPGNEFDFSSGEDLCREFNFRNIGDVMYI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcaaatcatcagacaagccaaagccaaagctaaggcacaggaaaggcttgtgg
tcacctgaagaagatcaaaggcttggaagctatgtctttcaacatggccatggatgttgg
agctctgtccccattaatgctggcttgcagaggactgggaagagctgcagattaagatgg
attaattacttgagaccaggactgaaaagaggggcgttttctacagacgaagaagagaca
atcctgacccttcatcgcatgttaggcaacaagtggtctcaaattgcacagcatttgcct
ggaagaacagacaatgagataaagaaccattggcattcctatttgaagaaaaagttgttc
aaagctgaaggaatggaatctcctaataagactcaatctgccagctcaaactcagacaat
atggatctttcaccctctcccaaaaggcttaaaatgcaaagtcctgaatcgtcaatgaat
atggaaaaaccatcaactgatatcgaccggccggtacttccacggatgtttgactatctt
aaagaacctaacagaagctccttattaccaaaggttatgtttgctgagtggctctcactt
gacagctttgcaagttcaggtgagcctgtggtttcaaagagtacattcgatcataatcca
agcttccaagacactagtttcatgcatcattacttactggaagaaggagcatttggtggc
gactatcaaaattctctaagcgatggttcgagcggcgacatttttagttcagaattcaaa
tttgaaagccagagtccaggaaatgagtttgattttagctctggagaggatttatgtagg
gaattcaacttccgtaatattggtgatgtgatgtacatatga
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