Populus trichocarpa (black cottonwood): 7482119
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Entry
7482119 CDS
T01077
Name
(RefSeq) putative two-component response regulator ARR21
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7482119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7482119
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
7482119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
CCDC117
Motif
Other DBs
NCBI-GeneID:
7482119
NCBI-ProteinID:
XP_002318255
LinkDB
All DBs
Position
12:complement(14905605..14910862)
Genome browser
AA seq
724 aa
AA seq
DB search
MASTQSSNALSSSLPKIHILIVDDDSTSLSVVSATLKTVSYKDNRNLELIVVTVKKPFDA
LSILRLKKGLFDLVVSDLHMPEMNGMELQKQVEEEFKLPVIIMSSDESKNVISRSLEGGA
AFYIVKPANKVDLKNVWHYAVAIKTGNSLSIKEIEGSREPSYSSTLVERLSLEDVNSATS
INDEKRYRKNGRKEERKSTKDDQEVDSQPASKKPKVVWTNSLHNRFLLALNHIGLDKAVP
KRILECMSVRGLSRENIASHLQKYRIFLKKVAERGGCSSKNLSGRDDLRTNFAPSQPFMM
FKNVQQEYSQRVTRASIQPGLGGNTIPALGGSSFRNLHSPNQQAPSNNSILQSPYGQSRL
FGNANSANQANQIRSGLESNYSIGENMPSYGGVIPNGLTHGTRPMQMYHPQNQARSYLQN
FGSPPLINRFGAVGIQATNYGSGVGDIGIINNSLNTNNNYVGIRVTTDGRLIGSGQMQLN
TNELSNGFSDGGHPCLMNWARNGNMNVASIGFNIASENYVARRGSFSAGFEGANQFFPPT
PFTSVYHGNSTPMLLPPPPPQHQLGLGNGGQNDFVFGLMNNSPPILGGNSNQQPQIGEGE
PNVSDMLLEPTNNPPAYQLPQGVAQMSTPLHELLTPDFLNSLHIDDNTPRNEQPSSQVQS
GEGAMNPICGSDANSMDGYFPNFDQQNGNGDLVDSELNNPQPVDNGPTGNQAWDDDLLES
LFGK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcatccactcagtcttccaatgccctaagctcctcccttccgaaaatccatatttta
attgtagatgatgattctacatctctttctgttgtttcagcaacgctgaaaacagttagc
tataaagacaatcgcaacctagaacttattgtggtcacagtcaagaaaccatttgatgct
ttatcaattcttcgactgaaaaagggtttatttgacttagttgtgtctgacctccatatg
cctgagatgaatggcatggaactacaaaaacaagtggaagaagaattcaagcttcctgtg
attataatgtcctcagatgaaagtaagaacgtcatatcaagaagtttagagggtggtgct
gcgttttatatagtgaaaccagctaacaaagttgatctcaagaatgtgtggcattatgca
gttgcaatcaaaacaggtaactccctttcaatcaaggaaatagaaggctctcgagaacca
tcatattcttctacattggttgagagattatcccttgaagatgtgaactctgcaacatct
atcaatgatgaaaaacgttatagaaaaaatggaagaaaggaagaaaggaagagcacaaag
gatgatcaagaagtagatagtcagcctgcctcgaaaaagcctaaggtggtttggactaat
tcacttcacaaccggtttttgctggccttaaaccatatagggctagacaaggctgttcca
aaaagaattcttgaatgcatgagtgtgcgagggctgtcaagagaaaatattgccagtcac
ttacagaagtatcgaatcttccttaaaaaggttgcagagagaggtggttgttcatcgaag
aacttgtcaggacgagatgatcttaggacaaactttgcacctagccaaccctttatgatg
ttcaaaaatgtccagcaggaatattcccaacgagtaacaagagcatcaattcaacctggt
cttggagggaacaccattccagctcttggtggttccagttttaggaacttgcattctcca
aaccaacaggctccgagcaacaactccatacttcaatcaccatacgggcagtctcgttta
tttggcaatgctaattctgctaatcaggcaaaccaaataagatcaggactggaatcaaac
tatagtattggagaaaacatgccttcttatggaggtgtgatccctaatggcctcactcat
ggtacaaggccaatgcaaatgtaccatccgcaaaatcaagcaagatcatatcttcagaat
tttggtagcccaccactaattaacaggtttggtgctgttggaattcaggctaccaactac
gggtcaggagttggggatataggaatcatcaacaattccttgaacaccaacaataattat
gttggaattcgtgtgactaccgatggacgcctcattggatcaggccaaatgcaactcaat
acgaatgaactatcaaatggctttagtgatggtggtcatccttgcttgatgaattgggct
cgtaatggcaacatgaacgttgcatctatagggtttaatatagcgtcagaaaattatgtg
gctcgtaggggatctttttctgctggttttgagggtgcaaaccaattcttcccaccaaca
ccattcactagtgtttatcatgggaatagtactccaatgctgctgccaccaccaccacca
cagcaccagcttggtcttggaaatggaggacaaaatgactttgtgtttggcctcatgaac
aacagccctcctatcttgggtgggaattctaatcaacagcctcagattggcgaaggtgaa
ccgaatgttagcgacatgcttttggaacctaccaacaatccacctgcttatcagcttcca
caaggtgttgctcaaatgagcactcccttgcatgaactcctgactccggacttcttgaac
tcacttcacattgatgacaacactcctcggaatgaacaaccttctagccaggttcaaagt
ggagaaggagctatgaaccccatctgcggaagcgatgctaattcaatggatggatatttt
ccaaactttgatcagcaaaatggcaatggtgaccttgtggattctgagctcaataaccct
caaccagttgacaatgggccaacaggaaatcaggcttgggatgatgatttactggagtct
ttgttcggaaaatga
DBGET
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