Populus trichocarpa (black cottonwood): 7482158
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Entry
7482158 CDS
T01077
Name
(RefSeq) agamous-like MADS-box protein MADS3 isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7482158
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
7482158
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Paralog
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GFIT
Motif
Pfam:
K-box
SRF-TF
Cluap1
Myo5a
Mgr1
KASH_CCD
FapA
Med4
Herpes_BLRF2
AAA_23
Motif
Other DBs
NCBI-GeneID:
7482158
NCBI-ProteinID:
XP_006377087
UniProt:
U5FXL4
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Position
12:14754962..14763302
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AA seq
233 aa
AA seq
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MGRGKVVLERIENKISRQVTFSKRRNGLLKKAYELSLLCDAEVALIIFSSHGKLFEFSSI
DMNSILQRYRQCCYSTQDTNIPEEGSHNLYQEVSRLRAKCETLQRSQRNFLGEDLEPLAF
KELEKIEKQLDKTLSQARQRKTQLMFDKMEELRLKEQELEEENKQLKTKLEEVVLRLPAI
QGVRDPSKADGYKHSEPLPTLQMGHHQFVYQEQAFDARTNIPGKSNPTPRWLS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggaaaggtggttttggagaggatagagaacaagatcagtcgtcaggtaact
ttctccaagagaagaaatggtttgctcaaaaaagcttatgaactctcgcttctttgcgat
gctgaggttgctcttatcatcttttctagccatggcaagctttttgagtttagtagcatt
gatatgaacagtatccttcagcgatatcgacaatgttgctacagcacacaagacaccaac
atccctgaggaagggtcacataacttataccaagaggtctccaggttaagggcaaaatgt
gagactcttcaacgctctcaaaggaattttcttggagaagatcttgaaccacttgcattt
aaagagttggagaagattgagaaacagcttgacaaaactctttcacaagctaggcaaagg
aagacacaactgatgtttgataaaatggaagagttacgcctaaaggaacaagagcttgaa
gaggaaaacaaacagctcaagaccaagctagaggaagttgttctgcgtctcccagctatt
caaggtgtacgagaccctagcaaggcagatggatataagcattctgaacctctacccact
ttacagatggggcaccatcaatttgtttaccaagaacaagcctttgatgccaggactaac
attccaggaaagagcaaccctactccaagatggctctcgtga
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